Difference between revisions of "ALLO-THR"
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(Created page with "Category:gene == Gene SJ01770 == * transcription-direction: ** negative * right-end-position: ** 122226 * left-end-position: ** 112708 * centisome-position: ** 77.187744...") |
(Created page with "Category:gene == Gene SJ08849 == * transcription-direction: ** positive * right-end-position: ** 96510 * left-end-position: ** 74314 * centisome-position: ** 17.244429...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ08849 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 96510 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 74314 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 17.244429 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[ALANINE-DEHYDROGENASE-RXN]] |
| − | + | ** Category: [[orthology]] | |
| − | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | |
| − | + | * [[PYRNUTRANSHYDROGEN-RXN]] | |
| − | |||
| − | |||
| − | |||
| − | ** Category: [[ | ||
| − | *** source: [[ | ||
| − | * [[ | ||
| − | |||
| − | |||
| − | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[ | + | * [[PWY1-2]] |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
** '''1''' reactions found over '''1''' reactions in the full pathway | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
| − | {{#set: transcription-direction= | + | * [[PWY-5083]] |
| − | {{#set: right-end-position= | + | ** '''5''' reactions found over '''6''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | {{#set: transcription-direction=positive}} |
| − | {{#set: centisome-position= | + | {{#set: right-end-position=96510}} |
| + | {{#set: left-end-position=74314}} | ||
| + | {{#set: centisome-position=17.244429 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=2}} |
Revision as of 14:23, 26 August 2019
Contents
Gene SJ08849
- transcription-direction:
- positive
- right-end-position:
- 96510
- left-end-position:
- 74314
- centisome-position:
- 17.244429
Organism(s) associated with this gene
Reaction(s) associated
- ALANINE-DEHYDROGENASE-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- PYRNUTRANSHYDROGEN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY1-2
- 1 reactions found over 1 reactions in the full pathway
- PWY-5083
- 5 reactions found over 6 reactions in the full pathway
