Difference between revisions of "ALLYSINE"

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(Created page with "Category:gene == Gene SJ08884 == * transcription-direction: ** positive * right-end-position: ** 159816 * left-end-position: ** 151175 * centisome-position: ** 35.13059...")
 
(Created page with "Category:gene == Gene SJ00878 == * transcription-direction: ** negative * right-end-position: ** 91451 * left-end-position: ** 80082 * centisome-position: ** 49.763554...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ08884 ==
+
== Gene SJ00878 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 159816
+
** 91451
 
* left-end-position:
 
* left-end-position:
−
** 151175
+
** 80082
 
* centisome-position:
 
* centisome-position:
−
** 35.13059    
+
** 49.763554    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[1.14.11.2-RXN]]
+
* [[1.1.1.8-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[6PGLUCONDEHYDROG-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[G3PD2]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[GLYC3PDEHYDROGBIOSYN-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-11320]]
+
* [[RXN-9952]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7894]]
+
* [[PWY-6118]]
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-7385]]
−
{{#set: right-end-position=159816}}
+
** '''7''' reactions found over '''9''' reactions in the full pathway
−
{{#set: left-end-position=151175}}
+
* [[PWY-7411]]
−
{{#set: centisome-position=35.13059   }}
+
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[P122-PWY]]
 +
** '''16''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-7902]]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5981]]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY0-1319]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5667]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[OXIDATIVEPENT-PWY]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=91451}}
 +
{{#set: left-end-position=80082}}
 +
{{#set: centisome-position=49.763554   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=9}}

Revision as of 14:23, 26 August 2019

Gene SJ00878

  • transcription-direction:
    • negative
  • right-end-position:
    • 91451
  • left-end-position:
    • 80082
  • centisome-position:
    • 49.763554

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6118
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7385
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-7411
    • 4 reactions found over 5 reactions in the full pathway
  • P122-PWY
    • 16 reactions found over 18 reactions in the full pathway
  • PWY-7902
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-5981
    • 3 reactions found over 5 reactions in the full pathway
  • PWY0-1319
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5667
    • 4 reactions found over 4 reactions in the full pathway
  • OXIDATIVEPENT-PWY
    • 3 reactions found over 3 reactions in the full pathway




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