Difference between revisions of "ALPHAGALACTOSID-RXN"
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(Created page with "Category:reaction == Reaction DNA-DIRECTED-RNA-POLYMERASE-RXN == * direction: ** reversible * common-name: ** dna-directed 5'-3' rna polymerase ** rna polymerase * ec-numb...") |
(Created page with "Category:reaction == Reaction ALPHAGALACTOSID-RXN == * direction: ** left-to-right * common-name: ** alpha-galactosidase * ec-number: ** [http://enzyme.expasy.org/EC/3.2.1...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction ALPHAGALACTOSID-RXN == |
* direction: | * direction: | ||
− | ** | + | ** left-to-right |
* common-name: | * common-name: | ||
− | ** | + | ** alpha-galactosidase |
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* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/2. | + | ** [http://enzyme.expasy.org/EC/3.2.1.22 ec-3.2.1.22] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[MELIBIOSE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[D-galactopyranose]][c] '''+''' 1 [[Glucopyranose]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | + | * Gene: [[SJ03511]] | |
− | * Gene: [[ | ||
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** Category: [[orthology]] | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[SJ02145]] |
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** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[SJ02144]] |
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** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
− | + | * Gene: [[SJ05258]] | |
− | |||
− | * Gene: [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
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== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY0-1301]], melibiose degradation: | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
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== External links == | == External links == | ||
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * METANETX-RXN : MNXR138470 | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R01101 R01101] | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28663 28663] | ||
* UNIPROT: | * UNIPROT: | ||
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P16551 P16551] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P27756 P27756] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P04824 P04824] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P06720 P06720] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P06280 P06280] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P51569 P51569] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/O93816 O93816] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q03647 Q03647] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P14749 P14749] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P28351 P28351] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P43467 P43467] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q99172 Q99172] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P41945 P41945] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P41946 P41946] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P41947 P41947] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q92457 Q92457] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q92456 Q92456] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q92451 Q92451] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/O04943 O04943] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/O04944 O04944] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q39811 Q39811] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q41100 Q41100] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q42656 Q42656] |
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</div> | </div> | ||
− | {{#set: direction= | + | {{#set: direction=left-to-right}} |
− | {{#set: common-name= | + | {{#set: common-name=alpha-galactosidase}} |
− | {{#set: ec-number=ec-2. | + | {{#set: ec-number=ec-3.2.1.22}} |
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=4}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=1}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
− | {{#set: reconstruction tool=pantograph | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} | + | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}} |
Latest revision as of 11:25, 18 March 2021
Contents
Reaction ALPHAGALACTOSID-RXN
- direction:
- left-to-right
- common-name:
- alpha-galactosidase
- ec-number:
Reaction formula
- 1 MELIBIOSE[c] + 1 WATER[c] => 1 D-galactopyranose[c] + 1 Glucopyranose[c]
Gene(s) associated with this reaction
- Gene: SJ03511
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ02145
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ02144
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ05258
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY0-1301, melibiose degradation:
- 1 reactions found over 1 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links