Difference between revisions of "AMCL"
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(Created page with "Category:reaction == Reaction RXN1F-168 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.14.11.12 ec-1.14.11.12] == Reaction formula == * 1...") |
(Created page with "Category:reaction == Reaction RXN-8730 == * direction: ** left-to-right * common-name: ** inositol-polyphosphate 5-phosphatase ** inositol-1,3,4,5-tetrakisphosphate 5-phos...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction RXN-8730 == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
+ | * common-name: | ||
+ | ** inositol-polyphosphate 5-phosphatase | ||
+ | ** inositol-1,3,4,5-tetrakisphosphate 5-phosphatase | ||
+ | ** inositol-1,4,5-trisphosphate 5-phosphatase | ||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/1. | + | ** [http://enzyme.expasy.org/EC/3.1.3.56 ec-3.1.3.56] |
== Reaction formula == | == Reaction formula == | ||
− | * | + | * 1 [[CPD-506]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[INOSITOL-1-3-4-TRIPHOSPHATE]][c] '''+''' 1 [[Pi]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | + | * Gene: [[SJ03588]] | |
− | * Gene: [[ | + | ** Category: [[annotation]] |
− | ** Category: [[ | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
− | *** Source: [[ | + | * Gene: [[SJ11565]] |
− | + | ** Category: [[annotation]] | |
− | * Gene: [[ | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
− | ** Category: [[ | + | * Gene: [[SJ12333]] |
− | *** Source: [[ | + | ** Category: [[annotation]] |
− | * Gene: [[ | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
− | ** Category: [[ | + | * Gene: [[SJ20267]] |
− | *** Source: [[ | + | ** Category: [[annotation]] |
− | * Gene: [[ | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
− | ** Category: [[ | ||
− | *** Source: [[ | ||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY- | + | * [[PWY-6362]], 1D-myo-inositol hexakisphosphate biosynthesis II (mammalian): |
− | ** '''2''' reactions found over ''' | + | ** '''5''' reactions found over '''5''' reactions in the full pathway |
+ | * [[PWY-6364]], D-myo-inositol (1,3,4)-trisphosphate biosynthesis: | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[ | + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
− | |||
== External links == | == External links == | ||
+ | * METANETX-RXN : MNXR108164 | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11393 11393] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R03430 R03430] |
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: ec-number=ec-1. | + | {{#set: common-name=inositol-polyphosphate 5-phosphatase|inositol-1,4,5-trisphosphate 5-phosphatase|inositol-1,3,4,5-tetrakisphosphate 5-phosphatase}} |
− | {{#set: nb gene associated= | + | {{#set: ec-number=ec-3.1.3.56}} |
− | {{#set: nb pathway associated= | + | {{#set: nb gene associated=4}} |
− | {{#set: reconstruction category= | + | {{#set: nb pathway associated=2}} |
− | {{#set: reconstruction tool= | + | {{#set: reconstruction category=annotation}} |
+ | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=saccharina_japonica_genome}} |
Revision as of 08:35, 15 March 2021
Contents
Reaction RXN-8730
- direction:
- left-to-right
- common-name:
- inositol-polyphosphate 5-phosphatase
- inositol-1,3,4,5-tetrakisphosphate 5-phosphatase
- inositol-1,4,5-trisphosphate 5-phosphatase
- ec-number:
Reaction formula
- 1 CPD-506[c] + 1 WATER[c] => 1 INOSITOL-1-3-4-TRIPHOSPHATE[c] + 1 Pi[c]
Gene(s) associated with this reaction
- Gene: SJ03588
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ11565
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ12333
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ20267
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6362, 1D-myo-inositol hexakisphosphate biosynthesis II (mammalian):
- 5 reactions found over 5 reactions in the full pathway
- PWY-6364, D-myo-inositol (1,3,4)-trisphosphate biosynthesis:
- 2 reactions found over 3 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links