Difference between revisions of "AMIDASE-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.22.1-RXN 3.4.22.1-RXN] == * direction: ** left-to-right * common-name: ** cathepsin b * ec-numb...")
(Created page with "Category:reaction == Reaction AMIDASE-RXN == * direction: ** left-to-right * common-name: ** amidase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.1.4 ec-3.5.1.4] == Re...")
 
(8 intermediate revisions by 4 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.22.1-RXN 3.4.22.1-RXN] ==
+
== Reaction AMIDASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** cathepsin b
+
** amidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.4.22.1 ec-3.4.22.1]
+
** [http://enzyme.expasy.org/EC/3.5.1.4 ec-3.5.1.4]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[General-Protein-Substrates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Peptides-holder]][c]
+
* 1 [[Monocarboxylic-Acid-Amides]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[Monocarboxylates]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ13517]]
+
* Gene: [[SJ01848]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ22527]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ16279]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ11012]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR108518
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03909 R03909]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P07688 P07688]
+
** [http://www.uniprot.org/uniprot/P11436 P11436]
−
** [http://www.uniprot.org/uniprot/P07858 P07858]
+
** [http://www.uniprot.org/uniprot/P27765 P27765]
−
** [http://www.uniprot.org/uniprot/P10605 P10605]
+
** [http://www.uniprot.org/uniprot/P81717 P81717]
−
** [http://www.uniprot.org/uniprot/P00787 P00787]
+
** [http://www.uniprot.org/uniprot/Q12559 Q12559]
−
** [http://www.uniprot.org/uniprot/P43157 P43157]
+
** [http://www.uniprot.org/uniprot/Q52736 Q52736]
−
** [http://www.uniprot.org/uniprot/P43233 P43233]
+
** [http://www.uniprot.org/uniprot/Q9ZBD4 Q9ZBD4]
−
** [http://www.uniprot.org/uniprot/Q20950 Q20950]
+
** [http://www.uniprot.org/uniprot/P22580 P22580]
−
** [http://www.uniprot.org/uniprot/P43510 P43510]
+
** [http://www.uniprot.org/uniprot/P95896 P95896]
−
** [http://www.uniprot.org/uniprot/P43509 P43509]
 
−
** [http://www.uniprot.org/uniprot/P43508 P43508]
 
−
** [http://www.uniprot.org/uniprot/P43507 P43507]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=cathepsin b}}
+
{{#set: common-name=amidase}}
−
{{#set: ec-number=ec-3.4.22.1}}
+
{{#set: ec-number=ec-3.5.1.4}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=4}}
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction AMIDASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • amidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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