Difference between revisions of "AMINO-CARBOXYMUCONATE-SEMIALDEHYDE-RXN"

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(Created page with "Category:reaction == Reaction RXN-7979 == * direction: ** left-to-right * synonymous: ** zea-epoxidase == Reaction formula == * 1 CPD1F-131[c] '''+''' 1 OXYGEN-MOLEC...")
(Created page with "Category:reaction == Reaction RXN-7967 == * direction: ** left-to-right * common-name: ** shikimate 3-dehydrogenase (nadp+) * ec-number: ** [http://enzyme.expasy.org/EC/1....")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-7979 ==
+
== Reaction RXN-7967 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* synonymous:
+
* common-name:
−
** zea-epoxidase
+
** shikimate 3-dehydrogenase (nadp+)
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.282 ec-1.1.1.282]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD1F-131]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 1 [[CPD1F-133]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[QUINATE]][c] '''=>''' 1 [[DEHYDROQUINATE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ1973]]
+
* Gene: [[SJ10493]]
−
** Category: [[manual]]
+
** Category: [[annotation]]
−
*** Source: [[sjap]], Tool: [[unknown-tool]], Assignment: n.a, Comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5174]], capsanthin and capsorubin biosynthesis:
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5945]], violaxanthin, antheraxanthin and zeaxanthin interconversion:
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[sjap]]; tool: [[curation]]; comment: transformation of antheraxanthin into violaxanthin (first cycle of xanthophylls)
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14938 14938]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R07200 R07200]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: synonymous=zea-epoxidase}}
+
{{#set: common-name=shikimate 3-dehydrogenase (nadp+)}}
 +
{{#set: ec-number=ec-1.1.1.282}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
−
{{#set: reconstruction comment=transformation of antheraxanthin into violaxanthin (first cycle of xanthophylls)}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=sjap}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 19:07, 14 January 2021

Reaction RXN-7967

  • direction:
    • left-to-right
  • common-name:
    • shikimate 3-dehydrogenase (nadp+)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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