Difference between revisions of "AMP-DEAMINASE-RXN"

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(Created page with "Category:reaction == Reaction 2.4.1.225-RXN == * direction: ** left-to-right * common-name: ** n-acetylglucosaminyl-proteoglycan 4-β-glucuronosyltransferase * ec-numb...")
(Created page with "Category:reaction == Reaction ALCDH_LPAREN_nadp_RPAREN_hi == * direction: ** left-to-right * common-name: ** alcohol dehydrogenase (ethanol, nadp), chloroplast == Reaction...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction 2.4.1.225-RXN ==
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== Reaction ALCDH_LPAREN_nadp_RPAREN_hi ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** n-acetylglucosaminyl-proteoglycan 4-β-glucuronosyltransferase
+
** alcohol dehydrogenase (ethanol, nadp), chloroplast
* ec-number:
 
** [http://enzyme.expasy.org/EC/2.4.1.225 ec-2.4.1.225]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[GlcNAc-GlcA-Gal-Gal-Xyl-Protein]][c] '''+''' 1 [[UDP-GLUCURONATE]][c] '''=>''' 1 [[GlcA-GlcNAc-GlcA-Gal-Gal-Xyl-Protein]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
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* 1.0 [[ACETALD]][h] '''+''' 1.0 [[NADPH]][h] '''+''' 1.0 [[PROTON]][h] '''=>''' 1.0 [[ETOH]][h] '''+''' 1.0 [[NADP]][h]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* Gene: [[SJ05644]]
* Gene: [[SJ11522]]
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** Category: [[orthology]]
** Category: [[annotation]]
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ01052]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ08300]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ08295]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ08296]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ14184]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ14192]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ07780]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6558]], heparan sulfate biosynthesis (late stages):
 
** '''7''' reactions found over '''13''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20909 20909]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R07335 R07335]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=n-acetylglucosaminyl-proteoglycan 4-&beta;-glucuronosyltransferase}}
+
{{#set: common-name=alcohol dehydrogenase (ethanol, nadp), chloroplast}}
{{#set: ec-number=ec-2.4.1.225}}
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{{#set: nb gene associated=1}}
{{#set: nb gene associated=8}}
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{{#set: nb pathway associated=0}}
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
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{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 15:04, 5 January 2021

Reaction ALCDH_LPAREN_nadp_RPAREN_hi

  • direction:
    • left-to-right
  • common-name:
    • alcohol dehydrogenase (ethanol, nadp), chloroplast

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links