Difference between revisions of "AMP-DEPHOSPHORYLATION-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=L-AMINO-ACID-OXIDASE-RXN L-AMINO-ACID-OXIDASE-RXN] == * direction: ** left-to-right * common-name:...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R-2-METHYLMALATE-DEHYDRATASE-RXN R-2-METHYLMALATE-DEHYDRATASE-RXN] == * direction: ** reversible *...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=L-AMINO-ACID-OXIDASE-RXN L-AMINO-ACID-OXIDASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=R-2-METHYLMALATE-DEHYDRATASE-RXN R-2-METHYLMALATE-DEHYDRATASE-RXN] ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** l-amino-acid oxidase
+
** (r)-2-methylmalate hydro-lyase (2-methylmaleate-forming)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.4.3.2 ec-1.4.3.2]
+
** [http://enzyme.expasy.org/EC/4.2.1.35 ec-4.2.1.35]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Amino-Acids-20]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[2-Oxo-carboxylates]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
+
* 1 [[CPD-31]][c] '''<=>''' 1 [[2-METHYLMALEATE]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19480]]
+
* Gene: [[SJ09771]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ00445]]
+
* Gene: [[SJ22396]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5101]], L-isoleucine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5101 PWY-5101]
 +
** '''4''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7698]], 2,5-xylenol and 3,5-xylenol degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7698 PWY-7698]
 +
** '''1''' reactions found over '''13''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13782 13782]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22332 22332]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01259 R01259]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03896 R03896]
−
* UNIPROT:
+
{{#set: direction=reversible}}
−
** [http://www.uniprot.org/uniprot/P23623 P23623]
+
{{#set: common-name=(r)-2-methylmalate hydro-lyase (2-methylmaleate-forming)}}
−
** [http://www.uniprot.org/uniprot/O93364 O93364]
+
{{#set: ec-number=ec-4.2.1.35}}
−
** [http://www.uniprot.org/uniprot/O04923 O04923]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=l-amino-acid oxidase}}
 
−
{{#set: ec-number=ec-1.4.3.2}}
 
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 09:30, 27 August 2019

Reaction R-2-METHYLMALATE-DEHYDRATASE-RXN

  • direction:
    • reversible
  • common-name:
    • (r)-2-methylmalate hydro-lyase (2-methylmaleate-forming)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5101, L-isoleucine biosynthesis II: PWY-5101
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-7698, 2,5-xylenol and 3,5-xylenol degradation: PWY-7698
    • 1 reactions found over 13 reactions in the full pathway

Reconstruction information

External links





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