Difference between revisions of "AMP5N"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FESO3OXI-RXN FESO3OXI-RXN] == * direction: ** reversible == Reaction formula == * 2 FE+3[c] '''...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1381 RXN-1381] == * direction: ** left-to-right * common-name: ** acyl-coa:sn-glycerol-3-phosph...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FESO3OXI-RXN FESO3OXI-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1381 RXN-1381] ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* common-name:
 +
** acyl-coa:sn-glycerol-3-phosphate 1-o-acyltransferase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/2.3.1.15 ec-2.3.1.15]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 2 [[FE+3]][c] '''+''' 1 [[SO3]][c] '''+''' 1 [[WATER]][c] '''<=>''' 2 [[FE+2]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[SULFATE]][c]
+
* 1 [[ACYL-COA]][c] '''+''' 1 [[GLYCEROL-3P]][c] '''=>''' 1 [[ACYL-SN-GLYCEROL-3P]][c] '''+''' 1 [[CO-A]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ11668]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ18504]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[FESULFOX-PWY]], sulfur oxidation II (Fe+3-dependent): [http://metacyc.org/META/NEW-IMAGE?object=FESULFOX-PWY FESULFOX-PWY]
+
* [[TRIGLSYN-PWY]], diacylglycerol and triacylglycerol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=TRIGLSYN-PWY TRIGLSYN-PWY]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5667]], CDP-diacylglycerol biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5667 PWY-5667]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
* RHEA:
−
{{#set: nb gene associated=0}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15326 15326]
−
{{#set: nb pathway associated=1}}
+
* LIGAND-RXN:
−
{{#set: reconstruction category=gap-filling}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00851 R00851]
−
{{#set: reconstruction tool=meneco}}
+
{{#set: direction=left-to-right}}
−
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: common-name=acyl-coa:sn-glycerol-3-phosphate 1-o-acyltransferase}}
−
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: ec-number=ec-2.3.1.15}}
 +
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=2}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 14:28, 26 August 2019

Reaction RXN-1381

  • direction:
    • left-to-right
  • common-name:
    • acyl-coa:sn-glycerol-3-phosphate 1-o-acyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • TRIGLSYN-PWY, diacylglycerol and triacylglycerol biosynthesis: TRIGLSYN-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-5667, CDP-diacylglycerol biosynthesis I: PWY-5667
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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