Difference between revisions of "AMPSYN-RXN"
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(Created page with "Category:reaction == Reaction RXN-9386 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/6.1.1.24 ec-6.1.1.24] == Reaction formula == * 1 ATP...") |
(Created page with "Category:reaction == Reaction RXN-12244 == * direction: ** left-to-right * common-name: ** 15-cis-phytoene desaturase ** 15,9'-di-cis phytofluene desaturase * synonymous:...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction RXN- | + | == Reaction RXN-12244 == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
| − | * | + | * common-name: |
| − | ** | + | ** 15-cis-phytoene desaturase |
| + | ** 15,9'-di-cis phytofluene desaturase | ||
| + | * synonymous: | ||
| + | ** plant-type phytoene desaturase | ||
| + | ** pds | ||
| + | ** phytoene desaturase (ambiguous) | ||
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[CPD-13171]][c] '''+''' 1 [[PLASTOQUINONE]][c] '''=>''' 1 [[CPD-7535]][c] '''+''' 1 [[Plastoquinols]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ08891]] |
| − | ** Category: [[ | + | ** Category: [[annotation]] |
| − | *** Source: [[ | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
| − | |||
| − | |||
| − | |||
== Pathway(s) == | == Pathway(s) == | ||
| − | * [[PWY- | + | * [[PWY-6475]], trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria): |
| − | ** ''' | + | ** '''8''' reactions found over '''8''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
| − | * category: [[ | + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30198 30198] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: | + | {{#set: common-name=15-cis-phytoene desaturase|15,9'-di-cis phytofluene desaturase}} |
| − | {{#set: nb gene associated= | + | {{#set: synonymous=pds|plant-type phytoene desaturase|phytoene desaturase (ambiguous)}} |
| + | {{#set: nb gene associated=1}} | ||
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} | ||
| − | {{#set: reconstruction category= | + | {{#set: reconstruction category=annotation}} |
| − | {{#set: reconstruction tool= | + | {{#set: reconstruction tool=pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=saccharina_japonica_genome}} |
Revision as of 11:25, 15 January 2021
Contents
Reaction RXN-12244
- direction:
- left-to-right
- common-name:
- 15-cis-phytoene desaturase
- 15,9'-di-cis phytofluene desaturase
- synonymous:
- plant-type phytoene desaturase
- pds
- phytoene desaturase (ambiguous)
Reaction formula
- 1 CPD-13171[c] + 1 PLASTOQUINONE[c] => 1 CPD-7535[c] + 1 Plastoquinols[c]
Gene(s) associated with this reaction
- Gene: SJ08891
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6475, trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria):
- 8 reactions found over 8 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- RHEA:
