Difference between revisions of "AMPSYN-RXN"
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(Created page with "Category:reaction == Reaction RXN-13139 == * direction: ** reversible * common-name: ** atp-dependent nadph-hydrate dehydratase * ec-number: ** [http://enzyme.expasy.org/E...") |
(Created page with "Category:reaction == Reaction AMPSYN-RXN == * direction: ** reversible * common-name: ** adenylosuccinate lyase * ec-number: ** [http://enzyme.expasy.org/EC/4.3.2.2 ec-4.3...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction RXN | + | == Reaction AMPSYN-RXN == |
* direction: | * direction: | ||
** reversible | ** reversible | ||
* common-name: | * common-name: | ||
| − | ** | + | ** adenylosuccinate lyase |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/4.2. | + | ** [http://enzyme.expasy.org/EC/4.3.2.2 ec-4.3.2.2] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[ADENYLOSUCC]][c] '''<=>''' 1 [[AMP]][c] '''+''' 1 [[FUM]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ06544]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[PWY-7219]], adenosine ribonucleotides de novo biosynthesis: | ||
| + | ** '''4''' reactions found over '''3''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
| − | * METANETX-RXN : | + | * METANETX-RXN : MNXR95493 |
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16856 16856] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
| − | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01083 R01083] |
| − | * | + | * UNIPROT: |
| − | ** [http://www. | + | ** [http://www.uniprot.org/uniprot/P21265 P21265] |
| + | ** [http://www.uniprot.org/uniprot/Q58339 Q58339] | ||
| + | ** [http://www.uniprot.org/uniprot/Q9CF40 Q9CF40] | ||
| + | ** [http://www.uniprot.org/uniprot/Q9PJ88 Q9PJ88] | ||
| + | ** [http://www.uniprot.org/uniprot/Q9JSP3 Q9JSP3] | ||
| + | ** [http://www.uniprot.org/uniprot/P0AB89 P0AB89] | ||
| + | ** [http://www.uniprot.org/uniprot/O65180 O65180] | ||
| + | ** [http://www.uniprot.org/uniprot/P12047 P12047] | ||
{{#set: direction=reversible}} | {{#set: direction=reversible}} | ||
| − | {{#set: common-name= | + | {{#set: common-name=adenylosuccinate lyase}} |
| − | {{#set: ec-number=ec-4.2. | + | {{#set: ec-number=ec-4.3.2.2}} |
{{#set: nb gene associated=1}} | {{#set: nb gene associated=1}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=1}} |
| − | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=orthology|annotation}} |
| − | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} |
Latest revision as of 11:22, 18 March 2021
Contents
Reaction AMPSYN-RXN
- direction:
- reversible
- common-name:
- adenylosuccinate lyase
- ec-number:
Reaction formula
- 1 ADENYLOSUCC[c] <=> 1 AMP[c] + 1 FUM[c]
Gene(s) associated with this reaction
- Gene: SJ06544
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-7219, adenosine ribonucleotides de novo biosynthesis:
- 4 reactions found over 3 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- METANETX-RXN : MNXR95493
- RHEA:
- LIGAND-RXN:
- UNIPROT:
