Difference between revisions of "AODAA"
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(Created page with "Category:reaction == Reaction RXN-11060 == * direction: ** left-to-right * common-name: ** glucuronosyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.17 ec...") |
(Created page with "Category:reaction == Reaction RXN66-318 == * direction: ** left-to-right * common-name: ** 4α-carboxy-5α-cholesta-8,24-dien-3β-ol:nad(p)+ 3-dehydrogenase...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction RXN66-318 == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
| − | ** | + | ** 4α-carboxy-5α-cholesta-8,24-dien-3β-ol:nad(p)+ 3-dehydrogenase (decarboxylating) |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/1.1.1.170 ec-1.1.1.170] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[CPD-4702]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-4581]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | + | * Gene: [[SJ04782]] | |
| − | * Gene: [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
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== Pathway(s) == | == Pathway(s) == | ||
| − | * [[PWY- | + | * [[PWY-6074]], zymosterol biosynthesis: |
| − | ** ''' | + | ** '''6''' reactions found over '''14''' reactions in the full pathway |
| + | * [[PWY66-4]], cholesterol biosynthesis III (via desmosterol): | ||
| + | ** '''14''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY66-341]], cholesterol biosynthesis I: | ||
| + | ** '''14''' reactions found over '''18''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * category: [[manual]]; source: [[reactions_add_sjap]]; tool: [[curation]]; comment: curation sterols (girard et al.) | ||
== External links == | == External links == | ||
| + | * METANETX-RXN : MNXR123718 | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: common-name= | + | {{#set: common-name=4α-carboxy-5α-cholesta-8,24-dien-3β-ol:nad(p)+ 3-dehydrogenase (decarboxylating)}} |
| − | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-1.1.1.170}} |
| − | {{#set: nb gene associated= | + | {{#set: nb gene associated=1}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
| − | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=annotation|manual}} |
| − | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=curation|pathwaytools}} |
| − | {{#set: reconstruction comment=n.a}} | + | {{#set: reconstruction comment=curation sterols (girard et al.)|n.a}} |
| − | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=reactions_add_sjap|saccharina_japonica_genome}} |
Revision as of 08:36, 15 March 2021
Contents
Reaction RXN66-318
- direction:
- left-to-right
- common-name:
- 4α-carboxy-5α-cholesta-8,24-dien-3β-ol:nad(p)+ 3-dehydrogenase (decarboxylating)
- ec-number:
Reaction formula
- 1 CPD-4702[c] + 1 NAD-P-OR-NOP[c] => 1 CARBON-DIOXIDE[c] + 1 CPD-4581[c] + 1 NADH-P-OR-NOP[c]
Gene(s) associated with this reaction
- Gene: SJ04782
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6074, zymosterol biosynthesis:
- 6 reactions found over 14 reactions in the full pathway
- PWY66-4, cholesterol biosynthesis III (via desmosterol):
- 14 reactions found over 4 reactions in the full pathway
- PWY66-341, cholesterol biosynthesis I:
- 14 reactions found over 18 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: manual; source: reactions_add_sjap; tool: curation; comment: curation sterols (girard et al.)
External links
- METANETX-RXN : MNXR123718
