Difference between revisions of "AODAA"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11067 RXN-11067] == * direction: ** left-to-right * common-name: ** 5-methoxytryptamine oxidase...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6274 RXN0-6274] == * direction: ** left-to-right * common-name: ** trna(i6a37) synthase * ec-n...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6274 RXN0-6274] == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
| − | ** | + | ** trna(i6a37) synthase |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.5.1.75 ec-2.5.1.75] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[CPD- | + | * 1 [[CPD-4211]][c] '''+''' 1 [[tRNA-Adenosines-37]][c] '''=>''' 1 [[6-Dimethylallyladenosine37-tRNAs]][c] '''+''' 1 [[PPI]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ15410]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| − | * [[PWY- | + | * [[PWY-2781]], cis-zeatin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2781 PWY-2781] |
| − | ** '''1''' reactions found over ''' | + | ** '''1''' reactions found over '''5''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R01122 R01122] | ||
| + | * UNIPROT: | ||
| + | ** [http://www.uniprot.org/uniprot/Q9ZUX7 Q9ZUX7] | ||
| + | ** [http://www.uniprot.org/uniprot/P46811 P46811] | ||
| + | ** [http://www.uniprot.org/uniprot/P07884 P07884] | ||
| + | ** [http://www.uniprot.org/uniprot/Q9JUU5 Q9JUU5] | ||
| + | ** [http://www.uniprot.org/uniprot/P0A3Q6 P0A3Q6] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: common-name= | + | {{#set: common-name=trna(i6a37) synthase}} |
| − | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-2.5.1.75}} |
{{#set: nb gene associated=1}} | {{#set: nb gene associated=1}} | ||
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} | ||
| − | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=orthology|annotation}} |
| − | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 14:28, 26 August 2019
Contents
Reaction RXN0-6274
- direction:
- left-to-right
- common-name:
- trna(i6a37) synthase
- ec-number:
Reaction formula
- 1 CPD-4211[c] + 1 tRNA-Adenosines-37[c] => 1 6-Dimethylallyladenosine37-tRNAs[c] + 1 PPI[c]
Gene(s) associated with this reaction
- Gene: SJ15410
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
