Difference between revisions of "APIGNAR-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3221 PWY-3221] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-3398 tax-33...")
(Created page with "Category:reaction == Reaction GDP-MANNOSE-6-DEHYDROGENASE-RXN == * direction: ** left-to-right * common-name: ** gdp-mannose 6-dehydrogenase * ec-number: ** [http://enzyme...")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3221 PWY-3221] ==
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== Reaction GDP-MANNOSE-6-DEHYDROGENASE-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-3398 tax-3398]
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** left-to-right
 
* common-name:
 
* common-name:
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** dtdp-l-rhamnose biosynthesis ii
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** gdp-mannose 6-dehydrogenase
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== Reaction(s) found ==
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* ec-number:
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* [[DTDPGLUCDEHYDRAT-RXN]]
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** [http://enzyme.expasy.org/EC/1.1.1.132 ec-1.1.1.132]
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== Reaction(s) not found ==
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== Reaction formula ==
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No padmetRef was given during wikipage creation or pathway not in metacyc, data not available
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* 1 [[GDP-MANNOSE]][c] '''+''' 2 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-1828]][c] '''+''' 2 [[NADH]][c] '''+''' 3 [[PROTON]][c]
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{{#set: taxonomic-range=tax-3398}}
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== Gene(s) associated with this reaction  ==
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{{#set: common-name=dtdp-l-rhamnose biosynthesis ii}}
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* Gene: [[SJ11033]]
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{{#set: nb reaction found=1}}
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** Category: [[orthology]]
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{{#set: completion rate=n.a}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: nb total reaction=n.a}}
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* Gene: [[SJ03911]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ11024]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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== Pathway(s) ==
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* [[PWY-6073]], alginate biosynthesis I (algal):
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6082]], alginate biosynthesis II (bacterial):
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** '''3''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21731 21731]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R00880 R00880]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P11759 P11759]
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{{#set: direction=left-to-right}}
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{{#set: common-name=gdp-mannose 6-dehydrogenase}}
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{{#set: ec-number=ec-1.1.1.132}}
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{{#set: nb gene associated=3}}
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{{#set: nb pathway associated=2}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:47, 18 December 2020

Reaction GDP-MANNOSE-6-DEHYDROGENASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • gdp-mannose 6-dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6073, alginate biosynthesis I (algal):
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6082, alginate biosynthesis II (bacterial):
    • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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