Difference between revisions of "APPRT"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCINATE--COA-LIGASE-GDP-FORMING-RXN SUCCINATE--COA-LIGASE-GDP-FORMING-RXN] == * direction: ** rev...")
 
(Created page with "Category:reaction == Reaction APPRT == * direction: ** reversible * common-name: ** amp:diphosphate phospho-d-ribosyltransferase == Reaction formula == * 1.0 ADENINE[c...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCINATE--COA-LIGASE-GDP-FORMING-RXN SUCCINATE--COA-LIGASE-GDP-FORMING-RXN] ==
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== Reaction APPRT ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* common-name:
 
* common-name:
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** succinate-coa ligase
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** amp:diphosphate phospho-d-ribosyltransferase
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/6.2.1.4 ec-6.2.1.4]
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[CO-A]][c] '''+''' 1 [[GTP]][c] '''+''' 1 [[SUC]][c] '''<=>''' 1 [[GDP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[SUC-COA]][c]
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* 1.0 [[ADENINE]][c] '''+''' 1.0 [[PRPP]][c] '''<=>''' 1.0 [[AMP]][c] '''+''' 1.0 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[SJ03269]]
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* Gene: [[SJ12523]]
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ21782]]
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* Gene: [[SJ15126]]
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** Category: [[annotation]]
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** Category: [[orthology]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY66-398]], TCA cycle III (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398]
 
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** '''10''' reactions found over '''11''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22123 22123]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R00432 R00432]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/Q03184 Q03184]
 
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** [http://www.uniprot.org/uniprot/O08371 O08371]
 
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** [http://www.uniprot.org/uniprot/O84829 O84829]
 
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** [http://www.uniprot.org/uniprot/Q8LAD2 Q8LAD2]
 
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** [http://www.uniprot.org/uniprot/P53587 P53587]
 
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** [http://www.uniprot.org/uniprot/P53312 P53312]
 
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** [http://www.uniprot.org/uniprot/P36967 P36967]
 
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** [http://www.uniprot.org/uniprot/P13086 P13086]
 
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** [http://www.uniprot.org/uniprot/Q9Y436 Q9Y436]
 
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** [http://www.uniprot.org/uniprot/P68209 P68209]
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
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{{#set: common-name=succinate-coa ligase}}
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{{#set: common-name=amp:diphosphate phospho-d-ribosyltransferase}}
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{{#set: ec-number=ec-6.2.1.4}}
 
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
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{{#set: nb pathway associated=1}}
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{{#set: nb pathway associated=0}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pathwaytools|pantograph}}
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{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Latest revision as of 11:20, 18 March 2021

Reaction APPRT

  • direction:
    • reversible
  • common-name:
    • amp:diphosphate phospho-d-ribosyltransferase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=APPRT&oldid=140797"