Difference between revisions of "APPRT"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-308 RXN0-308] == * direction: ** left-to-right * common-name: ** l-cysteine:[protein cysteine]...")
(Created page with "Category:reaction == Reaction APPRT == * direction: ** reversible * common-name: ** amp:diphosphate phospho-d-ribosyltransferase == Reaction formula == * 1.0 ADENINE[c...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-308 RXN0-308] ==
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== Reaction APPRT ==
 
* direction:
 
* direction:
−
** left-to-right
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** reversible
 
* common-name:
 
* common-name:
−
** l-cysteine:[protein cysteine] sulfurtransferase
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** amp:diphosphate phospho-d-ribosyltransferase
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/2.8.1.7 ec-2.8.1.7]
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[CYS]][c] '''+''' 1 [[Cysteine-Desulfurase-L-cysteine]][c] '''=>''' 1 [[L-ALPHA-ALANINE]][c] '''+''' 1 [[L-Cysteine-Desulfurase-persulfide]][c]
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* 1.0 [[ADENINE]][c] '''+''' 1.0 [[PRPP]][c] '''<=>''' 1.0 [[AMP]][c] '''+''' 1.0 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* Gene: [[SJ12523]]
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* Gene: [[SJ17324]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ03223]]
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* Gene: [[SJ15126]]
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** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ13485]]
 
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** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ04060]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ09474]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ19133]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6891]], thiazole biosynthesis II (aerobic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6891 PWY-6891]
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6892]], thiazole biosynthesis I (facultative anaerobic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6892 PWY-6892]
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY0-1021]], L-alanine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1021 PWY0-1021]
 
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** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-6823]], molybdenum cofactor biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6823 PWY-6823]
 
−
** '''7''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7904]], tRNA-uridine 2-thiolation (thermophilic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7904 PWY-7904]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7892]], tRNA-uridine 2-thiolation (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7892 PWY-7892]
 
−
** '''3''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7891]], tRNA-uridine 2-thiolation (yeast mitochondria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7891 PWY-7891]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7889]], tRNA-uridine 2-thiolation (mammalian mitochondria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7889 PWY-7889]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7888]], tRNA-uridine 2-thiolation (cytoplasmic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7888 PWY-7888]
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
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{{#set: direction=reversible}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17458 17458]
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{{#set: common-name=amp:diphosphate phospho-d-ribosyltransferase}}
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* LIGAND-RXN:
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{{#set: nb gene associated=2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07460 R07460]
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{{#set: nb pathway associated=0}}
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{{#set: direction=left-to-right}}
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{{#set: reconstruction category=orthology}}
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{{#set: common-name=l-cysteine:[protein cysteine] sulfurtransferase}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: ec-number=ec-2.8.1.7}}
 
−
{{#set: nb gene associated=6}}
 
−
{{#set: nb pathway associated=9}}
 
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{{#set: reconstruction category=annotation|orthology}}
 
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
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{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Latest revision as of 11:20, 18 March 2021

Reaction APPRT

  • direction:
    • reversible
  • common-name:
    • amp:diphosphate phospho-d-ribosyltransferase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=APPRT&oldid=140797"