Difference between revisions of "APYRASE-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14229 RXN-14229] == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/1.3...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DETHIOBIOTIN-SYN-RXN DETHIOBIOTIN-SYN-RXN] == * direction: ** left-to-right * common-name: ** dethi...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14229 RXN-14229] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DETHIOBIOTIN-SYN-RXN DETHIOBIOTIN-SYN-RXN] ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* common-name:
 +
** dethiobiotin synthetase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.3.8.7 ec-1.3.8.7]
+
** [http://enzyme.expasy.org/EC/6.3.3.3 ec-6.3.3.3]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-196]][c] '''+''' 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[CPD0-2108]][c] '''+''' 1 [[ETF-Reduced]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[DIAMINONONANOATE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[DETHIOBIOTIN]][c] '''+''' 3 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ15262]]
+
* Gene: [[SJ14599]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY0-1507]], biotin biosynthesis from 8-amino-7-oxononanoate I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1507 PWY0-1507]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7380]], biotin biosynthesis from 8-amino-7-oxononanoate II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7380 PWY-7380]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30944 30944]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15805 15805]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03777 R03777]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03182 R03182]
−
{{#set: direction=reversible}}
+
* UNIPROT:
−
{{#set: ec-number=ec-1.3.8.7}}
+
** [http://www.uniprot.org/uniprot/Q9JV95 Q9JV95]
 +
** [http://www.uniprot.org/uniprot/Q9PIJ1 Q9PIJ1]
 +
** [http://www.uniprot.org/uniprot/P46397 P46397]
 +
** [http://www.uniprot.org/uniprot/P22818 P22818]
 +
** [http://www.uniprot.org/uniprot/P13000 P13000]
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=dethiobiotin synthetase}}
 +
{{#set: ec-number=ec-6.3.3.3}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 14:26, 26 August 2019

Reaction DETHIOBIOTIN-SYN-RXN

  • direction:
    • left-to-right
  • common-name:
    • dethiobiotin synthetase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-1507, biotin biosynthesis from 8-amino-7-oxononanoate I: PWY0-1507
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7380, biotin biosynthesis from 8-amino-7-oxononanoate II: PWY-7380
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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