Difference between revisions of "ARACHIDONATE-5-LIPOXYGENASE-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROPIONYL-COA-CARBOXY-RXN PROPIONYL-COA-CARBOXY-RXN] == * direction: ** reversible * common-name: *...")
(Created page with "Category:reaction == Reaction ARACHIDONATE-5-LIPOXYGENASE-RXN == * direction: ** left-to-right * common-name: ** arachidonate 5-lipoxygenase * synonymous: ** δ5-lipo...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROPIONYL-COA-CARBOXY-RXN PROPIONYL-COA-CARBOXY-RXN] ==
+
== Reaction ARACHIDONATE-5-LIPOXYGENASE-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** propionyl-coa carboxylase
+
** arachidonate 5-lipoxygenase
−
* ec-number:
+
* synonymous:
−
** [http://enzyme.expasy.org/EC/6.4.1.3 ec-6.4.1.3]
+
** δ5-lipoxygenase
 +
** c-5-lipoxygenase
 +
** arachidonic acid 5-lipoxygenase
 +
** leukotriene-a4 synthase
 +
** lta synthase
 +
** arachidonic 5-lipoxygenase
 +
** 5δ-lipoxygenase
 +
** leukotriene a4 synthase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[PROPIONYL-COA]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[D-METHYL-MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[ARACHIDONIC_ACID]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[6E8Z11Z14Z-5S-5-HYDROPEROXYCOSA-6]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ12870]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ12567]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ21862]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
−
* Gene: [[SJ08104]]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ08291]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ16634]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ16633]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ05859]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ16632]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ03316]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ08276]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ21859]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ05858]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789]
+
* [[PWY66-375]], leukotriene biosynthesis:
−
** '''8''' reactions found over '''18''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-5743]], 3-hydroxypropanoate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5743 PWY-5743]
 
−
** '''5''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PROPIONMET-PWY]], propanoyl CoA degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PROPIONMET-PWY PROPIONMET-PWY]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6728]], methylaspartate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6728 PWY-6728]
 
−
** '''11''' reactions found over '''19''' reactions in the full pathway
 
−
* [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7384 PWY-7384]
 
−
** '''6''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR107077
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23723 23723]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17486 17486]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01859 R01859]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01595 R01595]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q96CX0 Q96CX0]
+
** [http://www.uniprot.org/uniprot/P12527 P12527]
−
** [http://www.uniprot.org/uniprot/P07633 P07633]
+
** [http://www.uniprot.org/uniprot/P09917 P09917]
−
** [http://www.uniprot.org/uniprot/P05165 P05165]
+
** [http://www.uniprot.org/uniprot/Q7M0C1 Q7M0C1]
−
** [http://www.uniprot.org/uniprot/Q06101 Q06101]
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/Q20676 Q20676]
+
{{#set: common-name=arachidonate 5-lipoxygenase}}
−
** [http://www.uniprot.org/uniprot/O24789 O24789]
+
{{#set: synonymous=5&delta;-lipoxygenase|leukotriene a4 synthase|arachidonic acid 5-lipoxygenase|lta synthase|leukotriene-a4 synthase|arachidonic 5-lipoxygenase|&delta;5-lipoxygenase|c-5-lipoxygenase}}
−
{{#set: direction=reversible}}
+
{{#set: nb gene associated=11}}
−
{{#set: common-name=propionyl-coa carboxylase}}
+
{{#set: nb pathway associated=1}}
−
{{#set: ec-number=ec-6.4.1.3}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: nb gene associated=2}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: nb pathway associated=5}}
 
−
{{#set: reconstruction category=orthology|annotation}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction ARACHIDONATE-5-LIPOXYGENASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • arachidonate 5-lipoxygenase
  • synonymous:
    • δ5-lipoxygenase
    • c-5-lipoxygenase
    • arachidonic acid 5-lipoxygenase
    • leukotriene-a4 synthase
    • lta synthase
    • arachidonic 5-lipoxygenase
    • 5δ-lipoxygenase
    • leukotriene a4 synthase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY66-375, leukotriene biosynthesis:
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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