Difference between revisions of "ARG"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11855 RXN-11855] == * direction: ** left-to-right * common-name: ** rna (cytosine38-c5)-methylt...")
(Created page with "Category:metabolite == Metabolite CPD-1086 == * common-name: ** 5-amino-6-(5-phospho-d-ribitylamino)uracil * smiles: ** c(nc1(nc(nc(=o)c(n)=1)=o))c(o)c(o)c(o)cop([o-])(=o)...")
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[[Category:reaction]]
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[[Category:metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11855 RXN-11855] ==
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== Metabolite CPD-1086 ==
* direction:
 
** left-to-right
 
 
* common-name:
 
* common-name:
** rna (cytosine38-c5)-methyltransferase
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** 5-amino-6-(5-phospho-d-ribitylamino)uracil
* ec-number:
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* smiles:
** [http://enzyme.expasy.org/EC/2.1.1.204 ec-2.1.1.204]
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** c(nc1(nc(nc(=o)c(n)=1)=o))c(o)c(o)c(o)cop([o-])(=o)[o-]
== Reaction formula ==
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* inchi-key:
* 1 [[Cytosine-38-in-tRNAs]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[5-Methylcytosine-38-in-tRNAs]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
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** rqrinyisxyazkl-rpdrrwsusa-l
== Gene(s) associated with this reaction  ==
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* molecular-weight:
* Gene: [[SJ00150]]
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** 354.213
** Category: [[annotation]]
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== Reaction(s) known to consume the compound ==
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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== Reaction(s) known to produce the compound ==
== Pathway(s) ==
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* [[RIBOFLAVINSYNREDUC-RXN]]
== Reconstruction information  ==
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== Reaction(s) of unknown directionality ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=5-amino-6-(5-phospho-d-ribitylamino)uracil}}
== External links  ==
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{{#set: inchi-key=inchikey=rqrinyisxyazkl-rpdrrwsusa-l}}
* RHEA:
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{{#set: molecular-weight=354.213}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=42957 42957]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R00595 R00595]
 
{{#set: direction=left-to-right}}
 
{{#set: common-name=rna (cytosine38-c5)-methyltransferase}}
 
{{#set: ec-number=ec-2.1.1.204}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 

Revision as of 20:36, 18 December 2020

Metabolite CPD-1086

  • common-name:
    • 5-amino-6-(5-phospho-d-ribitylamino)uracil
  • smiles:
    • c(nc1(nc(nc(=o)c(n)=1)=o))c(o)c(o)c(o)cop([o-])(=o)[o-]
  • inchi-key:
    • rqrinyisxyazkl-rpdrrwsusa-l
  • molecular-weight:
    • 354.213

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality