Difference between revisions of "ARG-OXIDATION-RXN"

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(Created page with "Category:reaction == Reaction 2.4.1.155-RXN == * direction: ** left-to-right * common-name: ** alpha-1,6-mannosylglycoprotein 6-beta-n-acetylglucosaminyltransferase v * ec...")
(Created page with "Category:reaction == Reaction RXN-7663 == * direction: ** left-to-right * common-name: ** chlorophyllide-a:geranyl-geranyl diphosphate geranyl-geranyl transferase * ec-num...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2.4.1.155-RXN ==
+
== Reaction RXN-7663 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** alpha-1,6-mannosylglycoprotein 6-beta-n-acetylglucosaminyltransferase v
+
** chlorophyllide-a:geranyl-geranyl diphosphate geranyl-geranyl transferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.1.155 ec-2.4.1.155]
+
** [http://enzyme.expasy.org/EC/2.5.1.62 ec-2.5.1.62]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[24-2-N-linked-Glycan]][c] '''+''' 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''=>''' 1 [[24-26-N-linked-Glycan]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
+
* 1 [[CHLOROPHYLLIDE-A]][c] '''+''' 1 [[GERANYLGERANYL-PP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-7005]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ08576]]
+
* Gene: [[SJ07213]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7426]], complex N-linked glycan biosynthesis (vertebrates):
+
* [[PWY-5064]], chlorophyll a biosynthesis II:
−
** '''4''' reactions found over '''10''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16922 16922]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04665 R04665]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q08834 Q08834]
 
−
** [http://www.uniprot.org/uniprot/Q09328 Q09328]
 
−
** [http://www.uniprot.org/uniprot/Q16408 Q16408]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=alpha-1,6-mannosylglycoprotein 6-beta-n-acetylglucosaminyltransferase v}}
+
{{#set: common-name=chlorophyllide-a:geranyl-geranyl diphosphate geranyl-geranyl transferase}}
−
{{#set: ec-number=ec-2.4.1.155}}
+
{{#set: ec-number=ec-2.5.1.62}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}

Revision as of 15:07, 5 January 2021

Reaction RXN-7663

  • direction:
    • left-to-right
  • common-name:
    • chlorophyllide-a:geranyl-geranyl diphosphate geranyl-geranyl transferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5064, chlorophyll a biosynthesis II:
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=ARG-OXIDATION-RXN&oldid=64590"