Difference between revisions of "ARGDECARBOX-RXN"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.211-RXN 1.1.1.211-RXN] == * direction: ** reversible * common-name: ** long-chain-3-hydroxyac...") |
(Created page with "Category:reaction == Reaction ARGDECARBOX-RXN == * direction: ** reversible * common-name: ** arginine decarboxylase, biosynthetic * ec-number: ** [http://enzyme.expasy.or...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction ARGDECARBOX-RXN == |
* direction: | * direction: | ||
** reversible | ** reversible | ||
* common-name: | * common-name: | ||
− | ** | + | ** arginine decarboxylase, biosynthetic |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/4.1.1.19 ec-4.1.1.19] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[ARG]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[AGMATHINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ12405]] |
− | |||
− | |||
− | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY-6305]], superpathway of putrescine biosynthesis: | ||
+ | ** '''4''' reactions found over '''n.a''' reactions in the full pathway | ||
+ | * [[PWY0-1299]], arginine dependent acid resistance: | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[PWY-40]], putrescine biosynthesis I: | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-6834]], spermidine biosynthesis III: | ||
+ | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[ARGDEG-III-PWY]], L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway): | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY0-823]], L-arginine degradation III (arginine decarboxylase/agmatinase pathway): | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-43]], putrescine biosynthesis II: | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * METANETX-RXN : MNXR95940 | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17644 17644] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00566 R00566] |
* UNIPROT: | * UNIPROT: | ||
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P21170 P21170] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q9PPF5 Q9PPF5] |
+ | ** [http://www.uniprot.org/uniprot/Q9JT25 Q9JT25] | ||
+ | ** [http://www.uniprot.org/uniprot/P49726 P49726] | ||
+ | ** [http://www.uniprot.org/uniprot/P22220 P22220] | ||
+ | ** [http://www.uniprot.org/uniprot/P28629 P28629] | ||
+ | ** [http://www.uniprot.org/uniprot/Q43075 Q43075] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9SI64 Q9SI64] | ||
+ | ** [http://www.uniprot.org/uniprot/P72587 P72587] | ||
+ | ** [http://www.uniprot.org/uniprot/P74576 P74576] | ||
+ | ** [http://www.uniprot.org/uniprot/O24128 O24128] | ||
+ | ** [http://www.uniprot.org/uniprot/O23141 O23141] | ||
+ | ** [http://www.uniprot.org/uniprot/Q39827 Q39827] | ||
+ | ** [http://www.uniprot.org/uniprot/O81161 O81161] | ||
+ | ** [http://www.uniprot.org/uniprot/O04429 O04429] | ||
+ | ** [http://www.uniprot.org/uniprot/Q96412 Q96412] | ||
+ | ** [http://www.uniprot.org/uniprot/O81177 O81177] | ||
+ | ** [http://www.uniprot.org/uniprot/O64453 O64453] | ||
+ | </div> | ||
{{#set: direction=reversible}} | {{#set: direction=reversible}} | ||
− | {{#set: common-name= | + | {{#set: common-name=arginine decarboxylase, biosynthetic}} |
− | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-4.1.1.19}} |
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=1}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=7}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
{{#set: reconstruction source=saccharina_japonica_genome}} | {{#set: reconstruction source=saccharina_japonica_genome}} |
Latest revision as of 11:18, 18 March 2021
Contents
Reaction ARGDECARBOX-RXN
- direction:
- reversible
- common-name:
- arginine decarboxylase, biosynthetic
- ec-number:
Reaction formula
- 1 ARG[c] + 1 PROTON[c] <=> 1 AGMATHINE[c] + 1 CARBON-DIOXIDE[c]
Gene(s) associated with this reaction
- Gene: SJ12405
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6305, superpathway of putrescine biosynthesis:
- 4 reactions found over n.a reactions in the full pathway
- PWY0-1299, arginine dependent acid resistance:
- 1 reactions found over 1 reactions in the full pathway
- PWY-40, putrescine biosynthesis I:
- 2 reactions found over 2 reactions in the full pathway
- PWY-6834, spermidine biosynthesis III:
- 2 reactions found over 4 reactions in the full pathway
- ARGDEG-III-PWY, L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway):
- 3 reactions found over 3 reactions in the full pathway
- PWY0-823, L-arginine degradation III (arginine decarboxylase/agmatinase pathway):
- 2 reactions found over 2 reactions in the full pathway
- PWY-43, putrescine biosynthesis II:
- 3 reactions found over 3 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links