Difference between revisions of "ASPAMINOTRANS-RXN"

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(Created page with "Category:reaction == Reaction RXN-5463 == * direction: ** left-to-right * common-name: ** gdp-man:man2glcnac2-pp-dolichol α-1,6-mannosyltransferase * ec-number: ** [...")
(Created page with "Category:reaction == Reaction ASPAMINOTRANS-RXN == * direction: ** reversible * common-name: ** aspartate transaminase ** l-phenylalanine:2-oxoglutarate aminotransferase *...")
 
(2 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-5463 ==
+
== Reaction ASPAMINOTRANS-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** gdp-man:man2glcnac2-pp-dolichol α-1,6-mannosyltransferase
+
** aspartate transaminase
 +
** l-phenylalanine:2-oxoglutarate aminotransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.1.257 ec-2.4.1.257]
+
** [http://enzyme.expasy.org/EC/2.6.1.1 ec-2.6.1.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-5161]][c] '''+''' 1 [[GDP-MANNOSE]][c] '''=>''' 1 [[CPD-5162]][c] '''+''' 1 [[GDP]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-ASPARTATE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[OXALACETIC_ACID]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ17680]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ04188]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ08678]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ05778]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ07646]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ20943]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation initial phase (eukaryotic):
+
* [[ASPARAGINE-DEG1-PWY-1]], L-asparagine degradation III (mammalian):
−
** '''16''' reactions found over '''19''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[ASPARTATESYN-PWY]], L-aspartate biosynthesis:
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[GLUTDEG-PWY]], L-glutamate degradation II:
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5913]], partial TCA cycle (obligate autotrophs):
 +
** '''10''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7383]], anaerobic energy metabolism (invertebrates, cytosol):
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type:
 +
** '''10''' reactions found over '''14''' reactions in the full pathway
 +
* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type:
 +
** '''9''' reactions found over '''11''' reactions in the full pathway
 +
* [[ASPARTATE-DEG1-PWY]], L-aspartate degradation I:
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[MALATE-ASPARTATE-SHUTTLE-PWY]], malate/L-aspartate shuttle pathway:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21827 21827]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R06238 R06238]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00355 R00355]
−
* RHEA:
+
* UNIPROT:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29522 29522]
+
** [http://www.uniprot.org/uniprot/Q7LZ21 Q7LZ21]
−
{{#set: direction=left-to-right}}
+
** [http://www.uniprot.org/uniprot/P08906 P08906]
−
{{#set: common-name=gdp-man:man2glcnac2-pp-dolichol &alpha;-1,6-mannosyltransferase}}
+
** [http://www.uniprot.org/uniprot/P12343 P12343]
−
{{#set: ec-number=ec-2.4.1.257}}
+
** [http://www.uniprot.org/uniprot/Q06191 Q06191]
−
{{#set: nb gene associated=1}}
+
** [http://www.uniprot.org/uniprot/Q02635 Q02635]
−
{{#set: nb pathway associated=1}}
+
** [http://www.uniprot.org/uniprot/Q60317 Q60317]
−
{{#set: reconstruction category=annotation}}
+
** [http://www.uniprot.org/uniprot/O28151 O28151]
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/O67781 O67781]
 +
** [http://www.uniprot.org/uniprot/P08907 P08907]
 +
** [http://www.uniprot.org/uniprot/P12345 P12345]
 +
** [http://www.uniprot.org/uniprot/Q9X0Y2 Q9X0Y2]
 +
** [http://www.uniprot.org/uniprot/Q9PPF7 Q9PPF7]
 +
** [http://www.uniprot.org/uniprot/Q9JVS3 Q9JVS3]
 +
** [http://www.uniprot.org/uniprot/P53001 P53001]
 +
** [http://www.uniprot.org/uniprot/P96847 P96847]
 +
** [http://www.uniprot.org/uniprot/Q9K0P5 Q9K0P5]
 +
** [http://www.uniprot.org/uniprot/Q9X224 Q9X224]
 +
** [http://www.uniprot.org/uniprot/Q9Y9P0 Q9Y9P0]
 +
** [http://www.uniprot.org/uniprot/Q9RWP3 Q9RWP3]
 +
** [http://www.uniprot.org/uniprot/O66737 O66737]
 +
** [http://www.uniprot.org/uniprot/O28650 O28650]
 +
** [http://www.uniprot.org/uniprot/O30304 O30304]
 +
** [http://www.uniprot.org/uniprot/Q9CEK7 Q9CEK7]
 +
** [http://www.uniprot.org/uniprot/O27916 O27916]
 +
** [http://www.uniprot.org/uniprot/O05237 O05237]
 +
** [http://www.uniprot.org/uniprot/Q9YE99 Q9YE99]
 +
** [http://www.uniprot.org/uniprot/O25383 O25383]
 +
** [http://www.uniprot.org/uniprot/O27638 O27638]
 +
** [http://www.uniprot.org/uniprot/O96142 O96142]
 +
** [http://www.uniprot.org/uniprot/Q9ZLG5 Q9ZLG5]
 +
** [http://www.uniprot.org/uniprot/P00507 P00507]
 +
** [http://www.uniprot.org/uniprot/P44425 P44425]
 +
** [http://www.uniprot.org/uniprot/Q59569 Q59569]
 +
** [http://www.uniprot.org/uniprot/Q59197 Q59197]
 +
** [http://www.uniprot.org/uniprot/P37833 P37833]
 +
** [http://www.uniprot.org/uniprot/O48599 O48599]
 +
** [http://www.uniprot.org/uniprot/O33822 O33822]
 +
** [http://www.uniprot.org/uniprot/P05201 P05201]
 +
** [http://www.uniprot.org/uniprot/P05202 P05202]
 +
** [http://www.uniprot.org/uniprot/P14909 P14909]
 +
** [http://www.uniprot.org/uniprot/P17174 P17174]
 +
** [http://www.uniprot.org/uniprot/P33097 P33097]
 +
** [http://www.uniprot.org/uniprot/Q43057 Q43057]
 +
** [http://www.uniprot.org/uniprot/Q43305 Q43305]
 +
** [http://www.uniprot.org/uniprot/Q42794 Q42794]
 +
** [http://www.uniprot.org/uniprot/P12344 P12344]
 +
** [http://www.uniprot.org/uniprot/Q01802 Q01802]
 +
** [http://www.uniprot.org/uniprot/Q40325 Q40325]
 +
** [http://www.uniprot.org/uniprot/P36692 P36692]
 +
** [http://www.uniprot.org/uniprot/P28011 P28011]
 +
** [http://www.uniprot.org/uniprot/Q42391 Q42391]
 +
** [http://www.uniprot.org/uniprot/Q9L0L5 Q9L0L5]
 +
** [http://www.uniprot.org/uniprot/Q53951 Q53951]
 +
** [http://www.uniprot.org/uniprot/Q42803 Q42803]
 +
** [http://www.uniprot.org/uniprot/Q42425 Q42425]
 +
** [http://www.uniprot.org/uniprot/Q55128 Q55128]
 +
** [http://www.uniprot.org/uniprot/P72859 P72859]
 +
** [http://www.uniprot.org/uniprot/Q55453 Q55453]
 +
** [http://www.uniprot.org/uniprot/Q55679 Q55679]
 +
** [http://www.uniprot.org/uniprot/O48598 O48598]
 +
** [http://www.uniprot.org/uniprot/Q42991 Q42991]
 +
** [http://www.uniprot.org/uniprot/P46248 P46248]
 +
** [http://www.uniprot.org/uniprot/O48548 O48548]
 +
** [http://www.uniprot.org/uniprot/Q60013 Q60013]
 +
** [http://www.uniprot.org/uniprot/P28734 P28734]
 +
** [http://www.uniprot.org/uniprot/Q17994 Q17994]
 +
** [http://www.uniprot.org/uniprot/Q17983 Q17983]
 +
** [http://www.uniprot.org/uniprot/Q22066 Q22066]
 +
** [http://www.uniprot.org/uniprot/Q22067 Q22067]
 +
** [http://www.uniprot.org/uniprot/O01804 O01804]
 +
** [http://www.uniprot.org/uniprot/O54170 O54170]
 +
** [http://www.uniprot.org/uniprot/O42652 O42652]
 +
** [http://www.uniprot.org/uniprot/O94320 O94320]
 +
** [http://www.uniprot.org/uniprot/P46644 P46644]
 +
** [http://www.uniprot.org/uniprot/P00504 P00504]
 +
** [http://www.uniprot.org/uniprot/P00508 P00508]
 +
** [http://www.uniprot.org/uniprot/P00509 P00509]
 +
** [http://www.uniprot.org/uniprot/P00505 P00505]
 +
** [http://www.uniprot.org/uniprot/P00503 P00503]
 +
** [http://www.uniprot.org/uniprot/P00506 P00506]
 +
** [http://www.uniprot.org/uniprot/P26563 P26563]
 +
</div>
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=aspartate transaminase|l-phenylalanine:2-oxoglutarate aminotransferase}}
 +
{{#set: ec-number=ec-2.6.1.1}}
 +
{{#set: nb gene associated=5}}
 +
{{#set: nb pathway associated=9}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction ASPAMINOTRANS-RXN

  • direction:
    • reversible
  • common-name:
    • aspartate transaminase
    • l-phenylalanine:2-oxoglutarate aminotransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • ASPARAGINE-DEG1-PWY-1, L-asparagine degradation III (mammalian):
    • 3 reactions found over 3 reactions in the full pathway
  • ASPARTATESYN-PWY, L-aspartate biosynthesis:
    • 1 reactions found over 1 reactions in the full pathway
  • GLUTDEG-PWY, L-glutamate degradation II:
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5913, partial TCA cycle (obligate autotrophs):
    • 10 reactions found over 8 reactions in the full pathway
  • PWY-7383, anaerobic energy metabolism (invertebrates, cytosol):
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-7117, C4 photosynthetic carbon assimilation cycle, PEPCK type:
    • 10 reactions found over 14 reactions in the full pathway
  • PWY-7115, C4 photosynthetic carbon assimilation cycle, NAD-ME type:
    • 9 reactions found over 11 reactions in the full pathway
  • ASPARTATE-DEG1-PWY, L-aspartate degradation I:
    • 1 reactions found over 1 reactions in the full pathway
  • MALATE-ASPARTATE-SHUTTLE-PWY, malate/L-aspartate shuttle pathway:
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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