Difference between revisions of "ASPARAGHYD-RXN"

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(Created page with "Category:reaction == Reaction H2NEOPTERINALDOL-RXN == * direction: ** left-to-right * common-name: ** dihydroneopterin aldolase * ec-number: ** [http://enzyme.expasy.org/E...")
(Created page with "Category:reaction == Reaction PSII-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.10.3.9 ec-1.10.3.9] == Reaction formula == * 1 Lig...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction H2NEOPTERINALDOL-RXN ==
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== Reaction PSII-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** dihydroneopterin aldolase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.2.25 ec-4.1.2.25]
+
** [http://enzyme.expasy.org/EC/1.10.3.9 ec-1.10.3.9]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DIHYDRO-NEO-PTERIN]][c] '''=>''' 1 [[AMINO-OH-HYDROXYMETHYL-DIHYDROPTERIDINE]][c] '''+''' 1 [[GLYCOLALDEHYDE]][c]
+
* 1 [[Light]][c] '''+''' 2 [[PLASTOQUINONE]][c] '''+''' 4 [[PROTON]][e] '''+''' 2 [[WATER]][c] '''=>''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 4 [[PROTON]][c] '''+''' 2 [[Plastoquinols]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ22398]]
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* Gene: [[SJ10606]]
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** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6797]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (Methanocaldococcus):
+
* [[PWY-101]], photosynthesis light reactions:
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** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6148]], tetrahydromethanopterin biosynthesis:
 
−
** '''2''' reactions found over '''14''' reactions in the full pathway
 
−
* [[PWY-6147]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I:
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7539]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia):
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10541 10541]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30250 30250]
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* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03504 R03504]
 
−
* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P22291 P22291]
 
−
** [http://www.uniprot.org/uniprot/Q9CGE4 Q9CGE4]
 
−
** [http://www.uniprot.org/uniprot/Q9JUL3 Q9JUL3]
 
−
** [http://www.uniprot.org/uniprot/P28823 P28823]
 
−
** [http://www.uniprot.org/uniprot/P29251 P29251]
 
−
** [http://www.uniprot.org/uniprot/P53848 P53848]
 
−
** [http://www.uniprot.org/uniprot/O75013 O75013]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
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{{#set: common-name=dihydroneopterin aldolase}}
+
{{#set: ec-number=ec-1.10.3.9}}
−
{{#set: ec-number=ec-4.1.2.25}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 11:25, 15 January 2021

Reaction PSII-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-101, photosynthesis light reactions:
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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