Difference between revisions of "ASPARTATE--TRNA-LIGASE-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2221 PWY-2221] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-183963 tax-...")
 
(Created page with "Category:reaction == Reaction ASPARTATE--TRNA-LIGASE-RXN == * direction: ** left-to-right * common-name: ** aspartate-trna ligase * ec-number: ** [http://enzyme.expasy.org...")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2221 PWY-2221] ==
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== Reaction ASPARTATE--TRNA-LIGASE-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-183963 tax-183963]
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** left-to-right
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-183924 tax-183924]
 
 
* common-name:
 
* common-name:
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** entner-doudoroff pathway iii (semi-phosphorylative)
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** aspartate-trna ligase
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== Reaction(s) found ==
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* ec-number:
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* [[2PGADEHYDRAT-RXN]]
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** [http://enzyme.expasy.org/EC/6.1.1.12 ec-6.1.1.12]
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* [[3PGAREARR-RXN]]
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== Reaction formula ==
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* [[GLUCONOLACT-RXN]]
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* 1 [[ASP-tRNAs]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[L-ASPARTATE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-ASP-tRNAs]][c] '''+''' 1 [[PPI]][c]
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* [[KDPGALDOL-RXN]]
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== Gene(s) associated with this reaction  ==
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* [[PEPDEPHOS-RXN]]
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* Gene: [[SJ22478]]
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* [[RXN-3443]]
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** Category: [[annotation]]
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== Reaction(s) not found ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=GLUCOSE-1-DEHYDROGENASE-NADP+-RXN GLUCOSE-1-DEHYDROGENASE-NADP+-RXN]
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** Category: [[orthology]]
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* [http://metacyc.org/META/NEW-IMAGE?object=DEOXYGLUCONOKIN-RXN DEOXYGLUCONOKIN-RXN]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=GLUCONATE-DEHYDRATASE-RXN GLUCONATE-DEHYDRATASE-RXN]
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* Gene: [[SJ03188]]
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{{#set: taxonomic-range=tax-183924|tax-183963}}
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** Category: [[annotation]]
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{{#set: common-name=entner-doudoroff pathway iii (semi-phosphorylative)}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: nb reaction found=6}}
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** Category: [[orthology]]
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{{#set: completion rate=0.67}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: nb total reaction=9}}
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== Pathway(s) ==
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* [[TRNA-CHARGING-PWY]], tRNA charging:
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** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* METANETX-RXN : MNXR115727
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19650 19650]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R05577 R05577]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P56459 P56459]
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** [http://www.uniprot.org/uniprot/O26328 O26328]
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** [http://www.uniprot.org/uniprot/O83950 O83950]
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** [http://www.uniprot.org/uniprot/Q58950 Q58950]
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** [http://www.uniprot.org/uniprot/Q9ZLL9 Q9ZLL9]
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** [http://www.uniprot.org/uniprot/O32038 O32038]
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** [http://www.uniprot.org/uniprot/O67589 O67589]
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** [http://www.uniprot.org/uniprot/P43817 P43817]
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** [http://www.uniprot.org/uniprot/O51402 O51402]
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** [http://www.uniprot.org/uniprot/Q9CE80 Q9CE80]
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** [http://www.uniprot.org/uniprot/Q9ZE17 Q9ZE17]
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** [http://www.uniprot.org/uniprot/Q9X1F4 Q9X1F4]
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** [http://www.uniprot.org/uniprot/Q9JT23 Q9JT23]
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** [http://www.uniprot.org/uniprot/O58776 O58776]
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** [http://www.uniprot.org/uniprot/O84546 O84546]
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** [http://www.uniprot.org/uniprot/Q9Z7P2 Q9Z7P2]
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** [http://www.uniprot.org/uniprot/Q9PHM7 Q9PHM7]
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** [http://www.uniprot.org/uniprot/P47282 P47282]
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** [http://www.uniprot.org/uniprot/Q51422 Q51422]
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** [http://www.uniprot.org/uniprot/Q03577 Q03577]
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** [http://www.uniprot.org/uniprot/P36429 P36429]
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** [http://www.uniprot.org/uniprot/P75068 P75068]
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** [http://www.uniprot.org/uniprot/P73851 P73851]
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** [http://www.uniprot.org/uniprot/Q48979 Q48979]
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** [http://www.uniprot.org/uniprot/Q49028 Q49028]
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** [http://www.uniprot.org/uniprot/P04802 P04802]
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** [http://www.uniprot.org/uniprot/P15179 P15179]
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** [http://www.uniprot.org/uniprot/P21889 P21889]
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** [http://www.uniprot.org/uniprot/P14868 P14868]
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** [http://www.uniprot.org/uniprot/P15178 P15178]
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** [http://www.uniprot.org/uniprot/O81892 O81892]
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** [http://www.uniprot.org/uniprot/O74407 O74407]
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** [http://www.uniprot.org/uniprot/O07683 O07683]
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</div>
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{{#set: direction=left-to-right}}
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{{#set: common-name=aspartate-trna ligase}}
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{{#set: ec-number=ec-6.1.1.12}}
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{{#set: nb gene associated=2}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pathwaytools|pantograph}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction ASPARTATE--TRNA-LIGASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • aspartate-trna ligase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • TRNA-CHARGING-PWY, tRNA charging:
    • 21 reactions found over 21 reactions in the full pathway

Reconstruction information

External links





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