Difference between revisions of "ASPARTATE--TRNA-LIGASE-RXN"
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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2221 PWY-2221] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-183963 tax-...") |
(Created page with "Category:reaction == Reaction ASPARTATE--TRNA-LIGASE-RXN == * direction: ** left-to-right * common-name: ** aspartate-trna ligase * ec-number: ** [http://enzyme.expasy.org...") |
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− | [[Category: | + | [[Category:reaction]] |
− | == | + | == Reaction ASPARTATE--TRNA-LIGASE-RXN == |
− | * | + | * direction: |
− | + | ** left-to-right | |
− | ** | ||
* common-name: | * common-name: | ||
− | ** | + | ** aspartate-trna ligase |
− | == Reaction(s) | + | * ec-number: |
− | * [[ | + | ** [http://enzyme.expasy.org/EC/6.1.1.12 ec-6.1.1.12] |
− | * [[ | + | == Reaction formula == |
− | * [[ | + | * 1 [[ASP-tRNAs]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[L-ASPARTATE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-ASP-tRNAs]][c] '''+''' 1 [[PPI]][c] |
− | * [[ | + | == Gene(s) associated with this reaction == |
− | * [[ | + | * Gene: [[SJ22478]] |
− | * [[ | + | ** Category: [[annotation]] |
− | == | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
− | * [http:// | + | ** Category: [[orthology]] |
− | * [http:// | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
− | * [http:// | + | * Gene: [[SJ03188]] |
− | {{#set: | + | ** Category: [[annotation]] |
− | {{#set: common-name= | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
− | {{#set: nb | + | ** Category: [[orthology]] |
− | {{#set: | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
− | {{#set: | + | == Pathway(s) == |
+ | * [[TRNA-CHARGING-PWY]], tRNA charging: | ||
+ | ** '''21''' reactions found over '''21''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | == External links == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * METANETX-RXN : MNXR115727 | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19650 19650] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R05577 R05577] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P56459 P56459] | ||
+ | ** [http://www.uniprot.org/uniprot/O26328 O26328] | ||
+ | ** [http://www.uniprot.org/uniprot/O83950 O83950] | ||
+ | ** [http://www.uniprot.org/uniprot/Q58950 Q58950] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZLL9 Q9ZLL9] | ||
+ | ** [http://www.uniprot.org/uniprot/O32038 O32038] | ||
+ | ** [http://www.uniprot.org/uniprot/O67589 O67589] | ||
+ | ** [http://www.uniprot.org/uniprot/P43817 P43817] | ||
+ | ** [http://www.uniprot.org/uniprot/O51402 O51402] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CE80 Q9CE80] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZE17 Q9ZE17] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9X1F4 Q9X1F4] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JT23 Q9JT23] | ||
+ | ** [http://www.uniprot.org/uniprot/O58776 O58776] | ||
+ | ** [http://www.uniprot.org/uniprot/O84546 O84546] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9Z7P2 Q9Z7P2] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PHM7 Q9PHM7] | ||
+ | ** [http://www.uniprot.org/uniprot/P47282 P47282] | ||
+ | ** [http://www.uniprot.org/uniprot/Q51422 Q51422] | ||
+ | ** [http://www.uniprot.org/uniprot/Q03577 Q03577] | ||
+ | ** [http://www.uniprot.org/uniprot/P36429 P36429] | ||
+ | ** [http://www.uniprot.org/uniprot/P75068 P75068] | ||
+ | ** [http://www.uniprot.org/uniprot/P73851 P73851] | ||
+ | ** [http://www.uniprot.org/uniprot/Q48979 Q48979] | ||
+ | ** [http://www.uniprot.org/uniprot/Q49028 Q49028] | ||
+ | ** [http://www.uniprot.org/uniprot/P04802 P04802] | ||
+ | ** [http://www.uniprot.org/uniprot/P15179 P15179] | ||
+ | ** [http://www.uniprot.org/uniprot/P21889 P21889] | ||
+ | ** [http://www.uniprot.org/uniprot/P14868 P14868] | ||
+ | ** [http://www.uniprot.org/uniprot/P15178 P15178] | ||
+ | ** [http://www.uniprot.org/uniprot/O81892 O81892] | ||
+ | ** [http://www.uniprot.org/uniprot/O74407 O74407] | ||
+ | ** [http://www.uniprot.org/uniprot/O07683 O07683] | ||
+ | </div> | ||
+ | {{#set: direction=left-to-right}} | ||
+ | {{#set: common-name=aspartate-trna ligase}} | ||
+ | {{#set: ec-number=ec-6.1.1.12}} | ||
+ | {{#set: nb gene associated=2}} | ||
+ | {{#set: nb pathway associated=1}} | ||
+ | {{#set: reconstruction category=orthology|annotation}} | ||
+ | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
+ | {{#set: reconstruction comment=n.a}} | ||
+ | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} |
Latest revision as of 11:24, 18 March 2021
Contents
Reaction ASPARTATE--TRNA-LIGASE-RXN
- direction:
- left-to-right
- common-name:
- aspartate-trna ligase
- ec-number:
Reaction formula
- 1 ASP-tRNAs[c] + 1 ATP[c] + 1 L-ASPARTATE[c] => 1 AMP[c] + 1 Charged-ASP-tRNAs[c] + 1 PPI[c]
Gene(s) associated with this reaction
- Gene: SJ22478
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ03188
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- TRNA-CHARGING-PWY, tRNA charging:
- 21 reactions found over 21 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links