Difference between revisions of "ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN"

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(Created page with "Category:reaction == Reaction RXN-16559 == * direction: ** reversible * common-name: ** long-chain-3-hydroxyacyl-coa dehydrogenase * ec-number: ** [http://enzyme.expasy.or...")
(Created page with "Category:reaction == Reaction PYRIDOXKIN-RXN == * direction: ** left-to-right * common-name: ** pyridoxal kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.35 ec-2...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-16559 ==
+
== Reaction PYRIDOXKIN-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** long-chain-3-hydroxyacyl-coa dehydrogenase
+
** pyridoxal kinase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.211 ec-1.1.1.211]
+
** [http://enzyme.expasy.org/EC/2.7.1.35 ec-2.7.1.35]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-17814]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[CPD-17815]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[PYRIDOXAL]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PYRIDOXAL_PHOSPHATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ21390]]
+
* Gene: [[SJ14436]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ16470]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08289]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7656]], Spodoptera littoralis pheromone biosynthesis:
+
* [[PLPSAL-PWY]], pyridoxal 5'-phosphate salvage I:
−
** '''4''' reactions found over '''22''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants):
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7282]], 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis:
 +
** '''6''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
* RHEA:
−
{{#set: common-name=long-chain-3-hydroxyacyl-coa dehydrogenase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10225 10225]
−
{{#set: ec-number=ec-1.1.1.211}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00174 R00174]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q7M2L1 Q7M2L1]
 +
** [http://www.uniprot.org/uniprot/P44690 P44690]
 +
** [http://www.uniprot.org/uniprot/P77150 P77150]
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=pyridoxal kinase}}
 +
{{#set: ec-number=ec-2.7.1.35}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 13:18, 14 January 2021

Reaction PYRIDOXKIN-RXN

  • direction:
    • left-to-right
  • common-name:
    • pyridoxal kinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PLPSAL-PWY, pyridoxal 5'-phosphate salvage I:
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7204, pyridoxal 5'-phosphate salvage II (plants):
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7282, 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis:
    • 6 reactions found over 10 reactions in the full pathway

Reconstruction information

External links





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