Difference between revisions of "ATAM"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction HBCO == * direction: ** left-to-right * common-name: ** 3-hydroxybutanoyl-coa:nad+ oxidoreductase == Reaction formula == * 1.0 NAD[c] '''...")
(Created page with "Category:reaction == Reaction 3.1.3.68-RXN == * direction: ** left-to-right * common-name: ** 2-deoxyglucose-6-phosphatase * ec-number: ** [http://enzyme.expasy.org/EC/3.1...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction HBCO ==
+
== Reaction 3.1.3.68-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** 3-hydroxybutanoyl-coa:nad+ oxidoreductase
+
** 2-deoxyglucose-6-phosphatase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/3.1.3.68 ec-3.1.3.68]
 
== Reaction formula ==
 
== Reaction formula ==
* 1.0 [[NAD]][c] '''+''' 1.0 [[S-3-HYDROXYBUTANOYL-COA]][c] '''=>''' 1.0 [[ACETOACETYL-COA]][c] '''+''' 1.0 [[NADH]][c] '''+''' 1.0 [[PROTON]][c]
+
* 1 [[2-DEOXY-D-GLUCOSE-6-PHOSPHATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[2-DEOXY-D-GLUCOSE]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ21390]]
+
* Gene: [[SJ04597]]
** Category: [[orthology]]
+
** Category: [[annotation]]
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ07911]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22237 22237]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02587 R02587]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=3-hydroxybutanoyl-coa:nad+ oxidoreductase}}
+
{{#set: common-name=2-deoxyglucose-6-phosphatase}}
{{#set: nb gene associated=1}}
+
{{#set: ec-number=ec-3.1.3.68}}
 +
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:04, 5 January 2021

Reaction 3.1.3.68-RXN

  • direction:
    • left-to-right
  • common-name:
    • 2-deoxyglucose-6-phosphatase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links