Difference between revisions of "ATDCDm"
Jump to navigation
Jump to search
(Created page with "Category:reaction == Reaction RXN-16759 == * direction: ** reversible * common-name: ** holo-[acyl-carrier-protein] synthase * ec-number: ** [http://enzyme.expasy.org/EC/2...") |
(Created page with "Category:reaction == Reaction RXN0-5144 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.61 ec-2.1.1.61] == Reaction formula == * 1 S-...") |
||
| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction RXN0-5144 == |
* direction: | * direction: | ||
| − | ** | + | ** left-to-right |
| − | |||
| − | |||
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/2. | + | ** [http://enzyme.expasy.org/EC/2.1.1.61 ec-2.1.1.61] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[tRNA-Containing-5AminoMe-2-ThioUrdines]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[tRNA-Containing-5MeAminoMe-2-ThioU]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ13939]] |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[PWY-7892]], tRNA-uridine 2-thiolation and selenation (bacteria): | ||
| + | ** '''3''' reactions found over '''11''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | |||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
| − | + | * RHEA: | |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19570 19570] |
| − | {{#set: ec-number=ec-2. | + | * LIGAND-RXN: |
| − | {{#set: nb gene associated= | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00601 R00601] |
| − | {{#set: nb pathway associated= | + | * UNIPROT: |
| − | {{#set: reconstruction category= | + | ** [http://www.uniprot.org/uniprot/Q9PJ66 Q9PJ66] |
| − | {{#set: reconstruction tool= | + | {{#set: direction=left-to-right}} |
| + | {{#set: ec-number=ec-2.1.1.61}} | ||
| + | {{#set: nb gene associated=1}} | ||
| + | {{#set: nb pathway associated=1}} | ||
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}} |
Revision as of 19:01, 14 January 2021
Contents
Reaction RXN0-5144
- direction:
- left-to-right
- ec-number:
Reaction formula
- 1 S-ADENOSYLMETHIONINE[c] + 1 tRNA-Containing-5AminoMe-2-ThioUrdines[c] => 1 ADENOSYL-HOMO-CYS[c] + 1 PROTON[c] + 1 tRNA-Containing-5MeAminoMe-2-ThioU[c]
Gene(s) associated with this reaction
- Gene: SJ13939
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- PWY-7892, tRNA-uridine 2-thiolation and selenation (bacteria):
- 3 reactions found over 11 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
