Difference between revisions of "ATDCM"
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(Created page with "Category:reaction == Reaction 4.99.1.3-RXN == * direction: ** left-to-right * common-name: ** sirohydrochlorin cobaltochelatase * ec-number: ** [http://enzyme.expasy.org/E...") |
(Created page with "Category:reaction == Reaction FUCOKINASE-RXN == * direction: ** left-to-right * common-name: ** l-fucokinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.52 ec-2.7.1...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction FUCOKINASE-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
| − | ** | + | ** l-fucokinase |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.7.1.52 ec-2.7.1.52] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[ATP]][c] '''+''' 1 [[L-Fucopyranoses]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CPD-488]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ13948]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| − | * [[PWY- | + | * [[PWY-6]], GDP-L-fucose biosynthesis II (from L-fucose): |
| − | ** ''' | + | ** '''1''' reactions found over '''2''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| Line 23: | Line 23: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13242 13242] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
| − | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R03161 R03161] |
| + | * UNIPROT: | ||
| + | ** [http://www.uniprot.org/uniprot/P11553 P11553] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: common-name= | + | {{#set: common-name=l-fucokinase}} |
| − | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-2.7.1.52}} |
{{#set: nb gene associated=1}} | {{#set: nb gene associated=1}} | ||
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} | ||
Revision as of 13:13, 14 January 2021
Contents
Reaction FUCOKINASE-RXN
- direction:
- left-to-right
- common-name:
- l-fucokinase
- ec-number:
Reaction formula
- 1 ATP[c] + 1 L-Fucopyranoses[c] => 1 ADP[c] + 1 CPD-488[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: SJ13948
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6, GDP-L-fucose biosynthesis II (from L-fucose):
- 1 reactions found over 2 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
