Difference between revisions of "ATDGM"

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(Created page with "Category:reaction == Reaction ALDEHYDE-DEHYDROGENASE-NADP+-RXN == * direction: ** left-to-right * common-name: ** aldehyde dehydrogenase [nad(p)+] * ec-number: ** [http://...")
(Created page with "Category:reaction == Reaction ATDGM == * direction: ** left-to-right * common-name: ** atp:dgmp phosphotransferase == Reaction formula == * 1.0 ATP[c] '''+''' 1.0 DG...")
 
(6 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ALDEHYDE-DEHYDROGENASE-NADP+-RXN ==
+
== Reaction ATDGM ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** aldehyde dehydrogenase [nad(p)+]
+
** atp:dgmp phosphotransferase
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/1.2.1.4 ec-1.2.1.4]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Aldehydes]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Carboxylates]][c] '''+''' 1 [[NADPH]][c] '''+''' 2 [[PROTON]][c]
+
* 1.0 [[ATP]][c] '''+''' 1.0 [[DGMP]][c] '''=>''' 1.0 [[ADP]][c] '''+''' 1.0 [[DGDP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ06456]]
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* Gene: [[SJ04335]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ06470]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7269]], NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast):
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11888 11888]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00634 R00634]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P11883 P11883]
 
−
** [http://www.uniprot.org/uniprot/Q8TBP8 Q8TBP8]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=aldehyde dehydrogenase [nad(p)+]}}
+
{{#set: common-name=atp:dgmp phosphotransferase}}
−
{{#set: ec-number=ec-1.2.1.4}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Latest revision as of 11:19, 18 March 2021

Reaction ATDGM

  • direction:
    • left-to-right
  • common-name:
    • atp:dgmp phosphotransferase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=ATDGM&oldid=140443"