Difference between revisions of "ATDUD"
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(Created page with "Category:reaction == Reaction RXN-14262 == * direction: ** reversible * common-name: ** lauroyl-coa dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.3.8.7 ec-1...") |
(Created page with "Category:reaction == Reaction RXN490-3641 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.14.11.57 ec-1.14.11.57] * synonymous: ** proline...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction RXN490-3641 == |
* direction: | * direction: | ||
| − | ** | + | ** left-to-right |
| − | |||
| − | |||
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/1. | + | ** [http://enzyme.expasy.org/EC/1.14.11.57 ec-1.14.11.57] |
| + | * synonymous: | ||
| + | ** proline hydroxylase | ||
| + | ** proline,2-oxoglutarate 4-dioxygenase | ||
| + | ** prolyl 4-hydroxylase | ||
| + | ** prolyl hydroxylase | ||
| + | ** protocollagen hydroxylase | ||
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PRO]][c] '''=>''' 1 [[4-HYDROXY-L-PROLINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ10762]] |
| − | ** Category: [[ | + | ** Category: [[orthology]] |
| − | *** Source: [[ | + | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | * Gene: [[SJ20526]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | * Gene: [[SJ20511]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * category: [[ | + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| + | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=51509 51509] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
| − | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01252 R01252] |
| − | {{#set: direction= | + | {{#set: direction=left-to-right}} |
| − | {{#set: | + | {{#set: ec-number=ec-1.14.11.57}} |
| − | {{#set: | + | {{#set: synonymous=proline,2-oxoglutarate 4-dioxygenase|proline hydroxylase|prolyl 4-hydroxylase|prolyl hydroxylase|protocollagen hydroxylase}} |
| − | {{#set: nb gene associated= | + | {{#set: nb gene associated=3}} |
{{#set: nb pathway associated=0}} | {{#set: nb pathway associated=0}} | ||
| − | {{#set: reconstruction category= | + | {{#set: reconstruction category=orthology}} |
| − | {{#set: reconstruction tool= | + | {{#set: reconstruction tool=pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 15:02, 5 January 2021
Contents
Reaction RXN490-3641
- direction:
- left-to-right
- ec-number:
- synonymous:
- proline hydroxylase
- proline,2-oxoglutarate 4-dioxygenase
- prolyl 4-hydroxylase
- prolyl hydroxylase
- protocollagen hydroxylase
Reaction formula
- 1 2-KETOGLUTARATE[c] + 1 OXYGEN-MOLECULE[c] + 1 PRO[c] => 1 4-HYDROXY-L-PROLINE[c] + 1 CARBON-DIOXIDE[c] + 1 SUC[c]
Gene(s) associated with this reaction
- Gene: SJ10762
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ20526
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ20511
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
External links
