Difference between revisions of "ATGD"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTOLDEHYD-RXN HISTOLDEHYD-RXN] == * direction: ** reversible * common-name: ** histidinol dehydro...")
(Created page with "Category:reaction == Reaction ATGD == * direction: ** left-to-right * common-name: ** atp:gdp phosphotransferase == Reaction formula == * 1.0 ATP[c] '''+''' 1.0 [[GDP]...")
 
(8 intermediate revisions by 4 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTOLDEHYD-RXN HISTOLDEHYD-RXN] ==
+
== Reaction ATGD ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** histidinol dehydrogenase
+
** atp:gdp phosphotransferase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[HISTIDINOL]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[HISTIDINAL]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1.0 [[ATP]][c] '''+''' 1.0 [[GDP]][c] '''=>''' 1.0 [[ADP]][c] '''+''' 1.0 [[GTP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07444]]
+
* Gene: [[SJ10125]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ18961]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ10107]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
 
−
** '''10''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
{{#set: direction=left-to-right}}
−
* RHEA:
+
{{#set: common-name=atp:gdp phosphotransferase}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33799 33799]
+
{{#set: nb gene associated=1}}
−
* LIGAND-RXN:
+
{{#set: nb pathway associated=0}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03012 R03012]
+
{{#set: reconstruction category=orthology}}
−
* UNIPROT:
+
{{#set: reconstruction tool=pantograph}}
−
** [http://www.uniprot.org/uniprot/P24226 P24226]
 
−
** [http://www.uniprot.org/uniprot/P44001 P44001]
 
−
** [http://www.uniprot.org/uniprot/O34651 O34651]
 
−
** [http://www.uniprot.org/uniprot/P63950 P63950]
 
−
** [http://www.uniprot.org/uniprot/Q9RSI4 Q9RSI4]
 
−
** [http://www.uniprot.org/uniprot/Q02136 Q02136]
 
−
** [http://www.uniprot.org/uniprot/Q9JTH9 Q9JTH9]
 
−
** [http://www.uniprot.org/uniprot/O30027 O30027]
 
−
** [http://www.uniprot.org/uniprot/Q9PM77 Q9PM77]
 
−
** [http://www.uniprot.org/uniprot/P10370 P10370]
 
−
** [http://www.uniprot.org/uniprot/P06988 P06988]
 
−
** [http://www.uniprot.org/uniprot/O66976 O66976]
 
−
** [http://www.uniprot.org/uniprot/Q58851 Q58851]
 
−
** [http://www.uniprot.org/uniprot/O26327 O26327]
 
−
** [http://www.uniprot.org/uniprot/Q9X0D1 Q9X0D1]
 
−
** [http://www.uniprot.org/uniprot/P18786 P18786]
 
−
** [http://www.uniprot.org/uniprot/P28736 P28736]
 
−
** [http://www.uniprot.org/uniprot/P45353 P45353]
 
−
** [http://www.uniprot.org/uniprot/Q12670 Q12670]
 
−
** [http://www.uniprot.org/uniprot/P72946 P72946]
 
−
** [http://www.uniprot.org/uniprot/P73058 P73058]
 
−
** [http://www.uniprot.org/uniprot/P00815 P00815]
 
−
** [http://www.uniprot.org/uniprot/P07685 P07685]
 
−
** [http://www.uniprot.org/uniprot/P16245 P16245]
 
−
</div>
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=histidinol dehydrogenase}}
 
−
{{#set: nb gene associated=3}}
 
−
{{#set: nb pathway associated=1}}
 
−
{{#set: reconstruction category=orthology|annotation}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Latest revision as of 11:22, 18 March 2021

Reaction ATGD

  • direction:
    • left-to-right
  • common-name:
    • atp:gdp phosphotransferase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=ATGD&oldid=141773"