Difference between revisions of "ATP-PYROPHOSPHATASE-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-366 RXN0-366] == * direction: ** left-to-right * common-name: ** guanosine hydrolase ** purine...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALGINATE-SYNTHASE-RXN ALGINATE-SYNTHASE-RXN] == * direction: ** left-to-right * ec-number: ** [http...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-366 RXN0-366] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALGINATE-SYNTHASE-RXN ALGINATE-SYNTHASE-RXN] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** guanosine hydrolase
 
−
** purine nucleosidase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.2.2.1 ec-3.2.2.1]
+
** [http://enzyme.expasy.org/EC/2.4.1.33 ec-2.4.1.33]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GUANOSINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[D-Ribofuranose]][c] '''+''' 1 [[GUANINE]][c]
+
* n [[CPD-1828]][c] '''=>''' n [[GDP]][c] '''+''' n [[PROTON]][c] '''+''' 1 [[Poly-beta-D-Mannuronate]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ02916]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ14933]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6606]], guanosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6606 PWY-6606]
+
* [[PWY-6082]], alginate biosynthesis II (bacterial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6082 PWY-6082]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-6599]], guanine and guanosine salvage II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6599 PWY-6599]
+
* [[PWY-6073]], alginate biosynthesis I (algal): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6073 PWY-6073]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30774 30774]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01677 R01677]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03129 R03129]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=purine nucleosidase|guanosine hydrolase}}
+
{{#set: ec-number=ec-2.4.1.33}}
−
{{#set: ec-number=ec-3.2.2.1}}
+
{{#set: nb gene associated=0}}
−
{{#set: nb gene associated=2}}
 
 
{{#set: nb pathway associated=2}}
 
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}

Revision as of 14:28, 26 August 2019

Reaction ALGINATE-SYNTHASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6082, alginate biosynthesis II (bacterial): PWY-6082
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6073, alginate biosynthesis I (algal): PWY-6073
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=ATP-PYROPHOSPHATASE-RXN&oldid=24110"