Difference between revisions of "ATPCL"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R344-RXN R344-RXN] == * direction: ** left-to-right * common-name: ** cob(i)yrinic acid a,c-diamide...")
(Created page with "Category:reaction == Reaction RXN-12710 == * direction: ** left-to-right * common-name: ** 3-oxoacyl coa thiolase ** acetyl-coa c-acyltransferase * ec-number: ** [http://e...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=R344-RXN R344-RXN] ==
+
== Reaction RXN-12710 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** cob(i)yrinic acid a,c-diamide adenosyltransferase
+
** 3-oxoacyl coa thiolase
 +
** acetyl-coa c-acyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.5.1.17 ec-2.5.1.17]
+
** [http://enzyme.expasy.org/EC/2.3.1.16 ec-2.3.1.16]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[CPD-694]][c] '''=>''' 1 [[CPD-690]][c] '''+''' 1 [[P3I]][c]
+
* 1 [[CO-A]][c] '''+''' 1 [[CPD-13699]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-13700]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ11469]]
+
* Gene: [[SJ16470]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ21817]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ14898]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ21818]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ09371]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7962]], adenosylcobinamide-GDP biosynthesis from cobyrinate a,c-diamide: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7962 PWY-7962]
+
* [[PWY-6945]], cholesterol degradation to androstenedione I (cholesterol oxidase):
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
** '''5''' reactions found over '''17''' reactions in the full pathway
 +
* [[PWY-6946]], cholesterol degradation to androstenedione II (cholesterol dehydrogenase):
 +
** '''6''' reactions found over '''22''' reactions in the full pathway
 +
* [[PWY-6948]], sitosterol degradation to androstenedione:
 +
** '''2''' reactions found over '''18''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11529 11529]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R05220 R05220]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=cob(i)yrinic acid a,c-diamide adenosyltransferase}}
+
{{#set: common-name=acetyl-coa c-acyltransferase|3-oxoacyl coa thiolase}}
−
{{#set: ec-number=ec-2.5.1.17}}
+
{{#set: ec-number=ec-2.3.1.16}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=5}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 20:41, 18 December 2020

Reaction RXN-12710

  • direction:
    • left-to-right
  • common-name:
    • 3-oxoacyl coa thiolase
    • acetyl-coa c-acyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6945, cholesterol degradation to androstenedione I (cholesterol oxidase):
    • 5 reactions found over 17 reactions in the full pathway
  • PWY-6946, cholesterol degradation to androstenedione II (cholesterol dehydrogenase):
    • 6 reactions found over 22 reactions in the full pathway
  • PWY-6948, sitosterol degradation to androstenedione:
    • 2 reactions found over 18 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=ATPCL&oldid=50095"