Difference between revisions of "Actinorhodin-Intermediate-2"

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(Created page with "Category:gene == Gene SJ16410 == * transcription-direction: ** negative * right-end-position: ** 37012 * left-end-position: ** 32863 * centisome-position: ** 11.634361...")
(Created page with "Category:metabolite == Metabolite CPD-1099 == * common-name: ** raffinose * smiles: ** c(oc1(c(c(c(c(co)o1)o)o)o))c2(c(c(c(c(o2)oc3(co)(c(c(c(co)o3)o)o))o)o)o) * inchi-key...")
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ16410 ==
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== Metabolite CPD-1099 ==
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* transcription-direction:
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* common-name:
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** negative
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** raffinose
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* right-end-position:
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* smiles:
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** 37012
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** c(oc1(c(c(c(c(co)o1)o)o)o))c2(c(c(c(c(o2)oc3(co)(c(c(c(co)o3)o)o))o)o)o)
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* left-end-position:
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* inchi-key:
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** 32863
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** mupfekgtmrgplj-zqskzdjdsa-n
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* centisome-position:
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* molecular-weight:
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** 11.634361   
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** 504.441
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[2.4.1.67-RXN]]
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== Reaction(s) associated ==
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* [[RXN-11502]]
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* [[NADH-DEHYDROG-A-RXN]]
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== Reaction(s) known to produce the compound ==
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** Category: [[annotation]]
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* [[2.4.1.67-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[2.4.1.82-RXN]]
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** Category: [[orthology]]
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* [[RXN-11501]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Reaction(s) of unknown directionality ==
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* [[NADH-DEHYDROGENASE-QUINONE-RXN]]
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{{#set: common-name=raffinose}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=mupfekgtmrgplj-zqskzdjdsa-n}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=504.441}}
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* [[NADH-DEHYDROGENASE-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN0-5330]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== Pathway(s) associated ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* [[PWY0-1335]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-4302]]
 
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** '''3''' reactions found over '''3''' reactions in the full pathway
 
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* [[PWY-3781]]
 
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** '''4''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY0-1334]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-6692]]
 
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** '''3''' reactions found over '''6''' reactions in the full pathway
 
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* [[PWY-5083]]
 
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** '''5''' reactions found over '''6''' reactions in the full pathway
 
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* [[PWY-7279]]
 
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** '''4''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY0-1573]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-7269]]
 
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** '''5''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY0-1568]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY0-1567]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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</div>
 
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{{#set: transcription-direction=negative}}
 
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{{#set: right-end-position=37012}}
 
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{{#set: left-end-position=32863}}
 
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{{#set: centisome-position=11.634361    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=4}}
 
−
{{#set: nb pathway associated=11}}
 

Revision as of 20:33, 18 December 2020

Metabolite CPD-1099

  • common-name:
    • raffinose
  • smiles:
    • c(oc1(c(c(c(c(co)o1)o)o)o))c2(c(c(c(c(o2)oc3(co)(c(c(c(co)o3)o)o))o)o)o)
  • inchi-key:
    • mupfekgtmrgplj-zqskzdjdsa-n
  • molecular-weight:
    • 504.441

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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