Difference between revisions of "App-his-tRNAs"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PGLUCONDEHYDRAT-RXN PGLUCONDEHYDRAT-RXN] == * direction: ** left-to-right * ec-number: ** [http://e...")
(Created page with "Category:gene == Gene SJ00073 == * transcription-direction: ** positive * right-end-position: ** 1220170 * left-end-position: ** 1217501 * centisome-position: ** 82.87647...")
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PGLUCONDEHYDRAT-RXN PGLUCONDEHYDRAT-RXN] ==
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== Gene SJ00073 ==
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* direction:
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* transcription-direction:
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** left-to-right
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** positive
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* ec-number:
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* right-end-position:
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** [http://enzyme.expasy.org/EC/4.2.1.12 ec-4.2.1.12]
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** 1220170
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== Reaction formula ==
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* left-end-position:
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* 1 [[CPD-2961]][c] '''=>''' 1 [[2-KETO-3-DEOXY-6-P-GLUCONATE]][c] '''+''' 1 [[WATER]][c]
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** 1217501
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== Gene(s) associated with this reaction ==
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* centisome-position:
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* Gene: [[SJ19719]]
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** 82.87647   
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** Category: [[orthology]]
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== Organism(s) associated with this gene ==
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[S.japonica_carotenoid_curated]]
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== Pathway(s) ==
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== Reaction(s) associated ==
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* [[ENTNER-DOUDOROFF-PWY]], Entner-Doudoroff shunt: [http://metacyc.org/META/NEW-IMAGE?object=ENTNER-DOUDOROFF-PWY ENTNER-DOUDOROFF-PWY]
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* [[PROTEIN-KINASE-RXN]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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** Category: [[annotation]]
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== Reconstruction information  ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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{{#set: transcription-direction=positive}}
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== External links  ==
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{{#set: right-end-position=1220170}}
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* RHEA:
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{{#set: left-end-position=1217501}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17278 17278]
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{{#set: centisome-position=82.87647    }}
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* LIGAND-RXN:
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02036 R02036]
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{{#set: nb reaction associated=1}}
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P0ADF6 P0ADF6]
 
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** [http://www.uniprot.org/uniprot/P21909 P21909]
 
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** [http://www.uniprot.org/uniprot/P56111 P56111]
 
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** [http://www.uniprot.org/uniprot/Q9JTV9 Q9JTV9]
 
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** [http://www.uniprot.org/uniprot/Q02139 Q02139]
 
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** [http://www.uniprot.org/uniprot/Q44327 Q44327]
 
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{{#set: direction=left-to-right}}
 
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{{#set: ec-number=ec-4.2.1.12}}
 
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{{#set: nb gene associated=1}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=orthology}}
 
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{{#set: reconstruction tool=pantograph}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}
 

Revision as of 09:28, 27 August 2019

Gene SJ00073

  • transcription-direction:
    • positive
  • right-end-position:
    • 1220170
  • left-end-position:
    • 1217501
  • centisome-position:
    • 82.87647

Organism(s) associated with this gene

Reaction(s) associated




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