Difference between revisions of "BIOMASS"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALACTOSIDE-2-L-FUCOSYLTRANSFERASE-RXN GALACTOSIDE-2-L-FUCOSYLTRANSFERASE-RXN] == * direction: ** l...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.11-RXN 3.1.26.11-RXN] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALACTOSIDE-2-L-FUCOSYLTRANSFERASE-RXN GALACTOSIDE-2-L-FUCOSYLTRANSFERASE-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.11-RXN 3.1.26.11-RXN] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.1.69 ec-2.4.1.69]
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** [http://enzyme.expasy.org/EC/3.1.26.11 ec-3.1.26.11]
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[13-BETA-D-GALACTOSYL-N-ACETYL-D-GLU]][c] '''+''' 1 [[CPD-13118]][c] '''=>''' 1 [[GDP]][c] '''+''' 1 [[III2-a-Fucosyllactotetraosylceramides]][c] '''+''' 1 [[PROTON]][c]
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* 1 [[WATER]][c] '''+''' 1 [[tRNA-precursors]][c] '''=>''' 1 [[SS-Oligoribonucleotides]][c] '''+''' 1 [[mature-tRNA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07152]]
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* Gene: [[SJ15607]]
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** Category: [[orthology]]
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** Category: [[annotation]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ11120]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ07782]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ03643]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7839]], lacto-series glycosphingolipids biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7839 PWY-7839]
 
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32175 32175]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04081 R04081]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P19526 P19526]
 
−
** [http://www.uniprot.org/uniprot/Q10984 Q10984]
 
−
** [http://www.uniprot.org/uniprot/Q10980 Q10980]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-2.4.1.69}}
+
{{#set: ec-number=ec-3.1.26.11}}
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{{#set: nb gene associated=1}}
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{{#set: nb gene associated=4}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 14:24, 26 August 2019

Reaction 3.1.26.11-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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