Difference between revisions of "BIOTIN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRYPTOPHAN-AMINOTRANSFERASE-RXN TRYPTOPHAN-AMINOTRANSFERASE-RXN] == * direction: ** reversible * co...")
 
(Created page with "Category:metabolite == Metabolite BIOTIN == * common-name: ** biotin * smiles: ** c1(sc(ccccc(=o)[o-])[ch]2(nc(=o)n[ch]12)) * inchi-key: ** ybjhbahktgyvgt-zkwxmuahsa-m * m...")
 
(9 intermediate revisions by 5 users not shown)
Line 1: Line 1:
−
[[Category:reaction]]
+
[[Category:metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRYPTOPHAN-AMINOTRANSFERASE-RXN TRYPTOPHAN-AMINOTRANSFERASE-RXN] ==
+
== Metabolite BIOTIN ==
−
* direction:
 
−
** reversible
 
 
* common-name:
 
* common-name:
−
** l-tryptophan:2-oxoglutarate aminotransferase
+
** biotin
−
* ec-number:
+
* smiles:
−
** [http://enzyme.expasy.org/EC/2.6.1.27 ec-2.6.1.27]
+
** c1(sc(ccccc(=o)[o-])[ch]2(nc(=o)n[ch]12))
−
== Reaction formula ==
+
* inchi-key:
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[TRP]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[INDOLE_PYRUVATE]][c]
+
** ybjhbahktgyvgt-zkwxmuahsa-m
−
== Gene(s) associated with this reaction  ==
+
* molecular-weight:
−
* Gene: [[SJ04188]]
+
** 243.3
−
** Category: [[annotation]]
+
== Reaction(s) known to consume the compound ==
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
* [[6.3.4.10-RXN]]
−
== Pathway(s) ==
+
* [[6.3.4.11-RXN]]
−
* [[PWY-5081]], L-tryptophan degradation VIII (to tryptophol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5081 PWY-5081]
+
* [[6.3.4.9-RXN]]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
* [[BIOTINLIG-RXN]]
−
* [[TRPKYNCAT-PWY]], L-tryptophan degradation IV (via indole-3-lactate): [http://metacyc.org/META/NEW-IMAGE?object=TRPKYNCAT-PWY TRPKYNCAT-PWY]
+
* [[ExchangeSeed-BIOTIN]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
* [[RXN0-7192]]
−
* [[TRPIAACAT-PWY]], indole-3-acetate biosynthesis VI (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=TRPIAACAT-PWY TRPIAACAT-PWY]
+
* [[TransportSeed-BIOTIN]]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
== Reaction(s) known to produce the compound ==
−
* [[PWY-581]], indole-3-acetate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-581 PWY-581]
+
* [[2.8.1.6-RXN]]
−
** '''5''' reactions found over '''12''' reactions in the full pathway
+
* [[ExchangeSeed-BIOTIN]]
−
== Reconstruction information  ==
+
* [[RXN-17473]]
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[TransportSeed-BIOTIN]]
−
== External links  ==
+
== Reaction(s) of unknown directionality ==
−
* RHEA:
+
{{#set: common-name=biotin}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14096 14096]
+
{{#set: inchi-key=inchikey=ybjhbahktgyvgt-zkwxmuahsa-m}}
−
* LIGAND-RXN:
+
{{#set: molecular-weight=243.3}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00684 R00684]
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=l-tryptophan:2-oxoglutarate aminotransferase}}
 
−
{{#set: ec-number=ec-2.6.1.27}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=4}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=saccharina_japonica_genome}}
 

Latest revision as of 11:15, 18 March 2021

Metabolite BIOTIN

  • common-name:
    • biotin
  • smiles:
    • c1(sc(ccccc(=o)[o-])[ch]2(nc(=o)n[ch]12))
  • inchi-key:
    • ybjhbahktgyvgt-zkwxmuahsa-m
  • molecular-weight:
    • 243.3

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=BIOTIN&oldid=138812"