Difference between revisions of "BRANCHED-CHAINAMINOTRANSFERLEU-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction TRYPTOPHAN--TRNA-LIGASE-RXN == * direction: ** left-to-right * common-name: ** tryptophan-trna ligase * ec-number: ** [http://enzyme.expasy.o...")
(Created page with "Category:reaction == Reaction BRANCHED-CHAINAMINOTRANSFERLEU-RXN == * direction: ** reversible * common-name: ** leucine transaminase * ec-number: ** [http://enzyme.expasy...")
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction TRYPTOPHAN--TRNA-LIGASE-RXN ==
+
== Reaction BRANCHED-CHAINAMINOTRANSFERLEU-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** tryptophan-trna ligase
+
** leucine transaminase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.1.1.2 ec-6.1.1.2]
+
** [http://enzyme.expasy.org/EC/2.6.1.6 ec-2.6.1.6]
 +
** [http://enzyme.expasy.org/EC/2.6.1.42 ec-2.6.1.42]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[TRP]][c] '''+''' 1 [[TRP-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-TRP-tRNAs]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[LEU]][c] '''<=>''' 1 [[2K-4CH3-PENTANOATE]][c] '''+''' 1 [[GLT]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ20749]]
+
* Gene: [[SJ06412]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ21092]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ04586]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ02283]]
+
* Gene: [[SJ17677]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[TRNA-CHARGING-PWY]], tRNA charging:
+
* [[LEU-DEG2-PWY]], L-leucine degradation I:
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5076]], L-leucine degradation III:
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7767]], L-leucine degradation IV (reductive Stickland reaction):
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[LEUSYN-PWY]], L-leucine biosynthesis:
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR96229
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24081 24081]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18324 18324]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03664 R03664]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01090 R01090]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P23381 P23381]
+
** [http://www.uniprot.org/uniprot/Q9PIM6 Q9PIM6]
−
** [http://www.uniprot.org/uniprot/Q9ZD76 Q9ZD76]
+
** [http://www.uniprot.org/uniprot/P38891 P38891]
−
** [http://www.uniprot.org/uniprot/O84589 O84589]
+
** [http://www.uniprot.org/uniprot/P47176 P47176]
−
** [http://www.uniprot.org/uniprot/Q9PIB4 Q9PIB4]
+
** [http://www.uniprot.org/uniprot/O86505 O86505]
−
** [http://www.uniprot.org/uniprot/Q9CJD1 Q9CJD1]
+
** [http://www.uniprot.org/uniprot/O14370 O14370]
−
** [http://www.uniprot.org/uniprot/P43835 P43835]
+
** [http://www.uniprot.org/uniprot/O32954 O32954]
−
** [http://www.uniprot.org/uniprot/Q9Z7A4 Q9Z7A4]
+
** [http://www.uniprot.org/uniprot/P0AB80 P0AB80]
−
** [http://www.uniprot.org/uniprot/Q9WYW2 Q9WYW2]
+
{{#set: direction=reversible}}
−
** [http://www.uniprot.org/uniprot/O26352 O26352]
+
{{#set: common-name=leucine transaminase}}
−
** [http://www.uniprot.org/uniprot/O51038 O51038]
+
{{#set: ec-number=ec-2.6.1.42|ec-2.6.1.6}}
−
** [http://www.uniprot.org/uniprot/Q9ZJX4 Q9ZJX4]
 
−
** [http://www.uniprot.org/uniprot/Q9JTQ0 Q9JTQ0]
 
−
** [http://www.uniprot.org/uniprot/Q58810 Q58810]
 
−
** [http://www.uniprot.org/uniprot/O83640 O83640]
 
−
** [http://www.uniprot.org/uniprot/P67590 P67590]
 
−
** [http://www.uniprot.org/uniprot/O67115 O67115]
 
−
** [http://www.uniprot.org/uniprot/P47372 P47372]
 
−
** [http://www.uniprot.org/uniprot/P32921 P32921]
 
−
** [http://www.uniprot.org/uniprot/Q12109 Q12109]
 
−
** [http://www.uniprot.org/uniprot/Q49901 Q49901]
 
−
** [http://www.uniprot.org/uniprot/P75510 P75510]
 
−
** [http://www.uniprot.org/uniprot/O42875 O42875]
 
−
** [http://www.uniprot.org/uniprot/O96771 O96771]
 
−
** [http://www.uniprot.org/uniprot/P17248 P17248]
 
−
** [http://www.uniprot.org/uniprot/P21656 P21656]
 
−
** [http://www.uniprot.org/uniprot/P04803 P04803]
 
−
** [http://www.uniprot.org/uniprot/P00954 P00954]
 
−
</div>
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=tryptophan-trna ligase}}
 
−
{{#set: ec-number=ec-6.1.1.2}}
 
 
{{#set: nb gene associated=3}}
 
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=4}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:25, 18 March 2021

Reaction BRANCHED-CHAINAMINOTRANSFERLEU-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • LEU-DEG2-PWY, L-leucine degradation I:
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-5076, L-leucine degradation III:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7767, L-leucine degradation IV (reductive Stickland reaction):
    • 1 reactions found over 5 reactions in the full pathway
  • LEUSYN-PWY, L-leucine biosynthesis:
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=BRANCHED-CHAINAMINOTRANSFERLEU-RXN&oldid=143118"