Difference between revisions of "BRANCHED-CHAINAMINOTRANSFERVAL-RXN"

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(Created page with "Category:reaction == Reaction DEHYDDEOXPHOSGALACT-ALDOL-RXN == * direction: ** reversible * common-name: ** 2-oxo-3-deoxygalactonate 6-phosphate aldolase * ec-number: ** [...")
(Created page with "Category:reaction == Reaction RXN0-363 == * direction: ** left-to-right * common-name: ** purine nucleosidase * ec-number: ** [http://enzyme.expasy.org/EC/3.2.2.1 ec-3.2.2...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction DEHYDDEOXPHOSGALACT-ALDOL-RXN ==
+
== Reaction RXN0-363 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** 2-oxo-3-deoxygalactonate 6-phosphate aldolase
+
** purine nucleosidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.2.55 ec-4.1.2.55]
+
** [http://enzyme.expasy.org/EC/3.2.2.1 ec-3.2.2.1]
−
** [http://enzyme.expasy.org/EC/4.1.2.21 ec-4.1.2.21]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DEHYDRO-DEOXY-GALACTONATE-PHOSPHATE]][c] '''<=>''' 1 [[GAP]][c] '''+''' 1 [[PYRUVATE]][c]
+
* 1 [[WATER]][c] '''+''' 1 [[XANTHOSINE]][c] '''=>''' 1 [[D-Ribofuranose]][c] '''+''' 1 [[XANTHINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03464]]
+
* Gene: [[SJ02916]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ14933]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7130]], L-glucose degradation:
+
* [[PWY-6596]], adenosine nucleotides degradation I:
−
** '''1''' reactions found over '''7''' reactions in the full pathway
+
** '''7''' reactions found over '''8''' reactions in the full pathway
−
* [[GALACTCAT-PWY]], D-galactonate degradation:
+
* [[PWY-6607]], guanosine nucleotides degradation I:
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24467 24467]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27995 27995]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01064 R01064]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02143 R02143]
−
{{#set: direction=reversible}}
+
{{#set: direction=left-to-right}}
−
{{#set: common-name=2-oxo-3-deoxygalactonate 6-phosphate aldolase}}
+
{{#set: common-name=purine nucleosidase}}
−
{{#set: ec-number=ec-4.1.2.55|ec-4.1.2.21}}
+
{{#set: ec-number=ec-3.2.2.1}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=2}}
 
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:36, 5 January 2021

Reaction RXN0-363

  • direction:
    • left-to-right
  • common-name:
    • purine nucleosidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6596, adenosine nucleotides degradation I:
    • 7 reactions found over 8 reactions in the full pathway
  • PWY-6607, guanosine nucleotides degradation I:
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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