Difference between revisions of "Beta-Gal-13-alpha-GalNac-R"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8672 RXN-8672] == * direction: ** left-to-right * common-name: ** glycine oxidase * ec-number:...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYLORNTRANSAM-RXN ACETYLORNTRANSAM-RXN] == * direction: ** reversible * common-name: ** n-acetyl...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8672 RXN-8672] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYLORNTRANSAM-RXN ACETYLORNTRANSAM-RXN] ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** glycine oxidase
+
** n-acetylornithine aminotransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.4.3.19 ec-1.4.3.19]
+
** [http://enzyme.expasy.org/EC/2.6.1.11 ec-2.6.1.11]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[D-ALANINE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[PYRUVATE]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[N-ALPHA-ACETYLORNITHINE]][c] '''<=>''' 1 [[CPD-469]][c] '''+''' 1 [[GLT]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ17412]]
+
* Gene: [[SJ07216]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[GLUTORN-PWY]], L-ornithine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUTORN-PWY GLUTORN-PWY]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYNBSUB-PWY ARGSYNBSUB-PWY]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5154 PWY-5154]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22689 22689]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18052 18052]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05861 R05861]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02283 R02283]
−
{{#set: direction=left-to-right}}
+
* UNIPROT:
−
{{#set: common-name=glycine oxidase}}
+
** [http://www.uniprot.org/uniprot/P18335 P18335]
−
{{#set: ec-number=ec-1.4.3.19}}
+
** [http://www.uniprot.org/uniprot/Q9PIR7 Q9PIR7]
 +
** [http://www.uniprot.org/uniprot/Q9JTX9 Q9JTX9]
 +
** [http://www.uniprot.org/uniprot/Q9CHD3 Q9CHD3]
 +
** [http://www.uniprot.org/uniprot/P30900 P30900]
 +
** [http://www.uniprot.org/uniprot/P18544 P18544]
 +
** [http://www.uniprot.org/uniprot/O74548 O74548]
 +
** [http://www.uniprot.org/uniprot/O14433 O14433]
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=n-acetylornithine aminotransferase}}
 +
{{#set: ec-number=ec-2.6.1.11}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 14:25, 26 August 2019

Reaction ACETYLORNTRANSAM-RXN

  • direction:
    • reversible
  • common-name:
    • n-acetylornithine aminotransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • GLUTORN-PWY, L-ornithine biosynthesis I: GLUTORN-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • ARGSYNBSUB-PWY, L-arginine biosynthesis II (acetyl cycle): ARGSYNBSUB-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-5154, L-arginine biosynthesis III (via N-acetyl-L-citrulline): PWY-5154
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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