Difference between revisions of "Biomass rxn"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RNA-URIDYLYLTRANSFERASE-RXN == * direction: ** reversible * common-name: ** rna uridylyltransferase * ec-number: ** [http://enzyme.expasy.org...")
(Created page with "Category:reaction == Reaction biomass_rxn == * direction: ** left-to-right == Reaction formula == * 0.01 4-AMINO-BUTYRATE[c] '''+''' 0.1 ARG[c] '''+''' 0.75 [[ASN]...")
 
(6 intermediate revisions by 2 users not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RNA-URIDYLYLTRANSFERASE-RXN ==
+
== Reaction biomass_rxn ==
 
* direction:
 
* direction:
** reversible
+
** left-to-right
* common-name:
 
** rna uridylyltransferase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/2.7.7.52 ec-2.7.7.52]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[RNA-Holder]][c] '''+''' 1 [[UTP]][c] '''<=>''' 1 [[PPI]][c] '''+''' 1 [[RNA-Holder]][c]
+
* 0.01 [[4-AMINO-BUTYRATE]][c] '''+''' 0.1 [[ARG]][c] '''+''' 0.75 [[ASN]][c] '''+''' 19.3055 [[CIT]][c] '''+''' 0.3 [[CYS]][c] '''+''' 2.7615 [[GLC]][c] '''+''' 10.7 [[GLN]][c] '''+''' 18.85 [[GLT]][c] '''+''' 3.8 [[GLY]][c] '''+''' 0.123 [[GLYCERATE]][c] '''+''' 2.375 [[GLYCEROL]][c] '''+''' 0.029 [[GLYCOLLATE]][c] '''+''' 0.1 [[HIS]][c] '''+''' 0.2 [[ILE]][c] '''+''' 26.6 [[L-ALPHA-ALANINE]][c] '''+''' 12.5 [[L-ASPARTATE]][c] '''+''' 0.1 [[L-ORNITHINE]][c] '''+''' 0.3 [[LEU]][c] '''+''' 0.35 [[LYS]][c] '''+''' 331.4 [[MANNITOL]][c] '''+''' 0.3 [[MET]][c] '''+''' 0.35 [[PHE]][c] '''+''' 1.35 [[PRO]][c] '''+''' 3.35 [[SER]][c] '''+''' 0.878 [[SUC]][c] '''+''' 0.65 [[THR]][c] '''+''' 9.37 [[THREO-DS-ISO-CITRATE]][c] '''+''' 0.115 [[TRP]][c] '''+''' 0.125 [[TYR]][c] '''+''' 0.85 [[VAL]][c] '''=>''' 1 [[BIOMASS]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ17317]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ12257]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[biomass_reaction]]; tool: [[curation]]; comment: forfba
 
== External links  ==
 
== External links  ==
{{#set: direction=reversible}}
+
{{#set: direction=left-to-right}}
{{#set: common-name=rna uridylyltransferase}}
+
{{#set: nb gene associated=0}}
{{#set: ec-number=ec-2.7.7.52}}
 
{{#set: nb gene associated=2}}
 
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=manual}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=forfba}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=biomass_reaction}}

Latest revision as of 11:21, 18 March 2021

Reaction biomass_rxn

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links