Difference between revisions of "Biomass rxn"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14812 RXN-14812] == * direction: ** reversible == Reaction formula == * 1 CPD-15709[c] '''<...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12455 RXN-12455] == * direction: ** left-to-right * common-name: ** trna-dihydrouridine17 synth...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12455 RXN-12455] == |
* direction: | * direction: | ||
| − | ** | + | ** left-to-right |
| + | * common-name: | ||
| + | ** trna-dihydrouridine17 synthase | ||
| + | * ec-number: | ||
| + | ** [http://enzyme.expasy.org/EC/1.3.1.88 ec-1.3.1.88] | ||
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Uracil17-in-tRNAs]][c] '''=>''' 1 [[56-Dihydrouracil17-in-tRNAs]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| + | * Gene: [[SJ02952]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | * Gene: [[SJ03254]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * category: [[ | + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
== External links == | == External links == | ||
| − | {{#set: direction= | + | * RHEA: |
| − | {{#set: nb gene associated= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=53370 53370] |
| + | {{#set: direction=left-to-right}} | ||
| + | {{#set: common-name=trna-dihydrouridine17 synthase}} | ||
| + | {{#set: ec-number=ec-1.3.1.88}} | ||
| + | {{#set: nb gene associated=2}} | ||
{{#set: nb pathway associated=0}} | {{#set: nb pathway associated=0}} | ||
| − | {{#set: reconstruction category= | + | {{#set: reconstruction category=annotation}} |
| − | {{#set: reconstruction tool= | + | {{#set: reconstruction tool=pathwaytools}} |
| − | {{#set: reconstruction comment= | + | {{#set: reconstruction comment=n.a}} |
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=saccharina_japonica_genome}} |
Revision as of 14:28, 26 August 2019
Contents
Reaction RXN-12455
- direction:
- left-to-right
- common-name:
- trna-dihydrouridine17 synthase
- ec-number:
Reaction formula
- 1 NADH-P-OR-NOP[c] + 1 PROTON[c] + 1 Uracil17-in-tRNAs[c] => 1 56-Dihydrouracil17-in-tRNAs[c] + 1 NAD-P-OR-NOP[c]
Gene(s) associated with this reaction
- Gene: SJ02952
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ03254
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- RHEA:
