Difference between revisions of "C1"

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(Created page with "Category:gene == Gene SJ06735 == * transcription-direction: ** positive * right-end-position: ** 71918 * left-end-position: ** 39016 * centisome-position: ** 51.415997...")
(Created page with "Category:metabolite == Metabolite C1 == * common-name: ** udp-n-acetyl-α-d-muramoyl-l-alanyl-γ-d-glutamyl-meso-2,6-diaminopimeloyl-d-alanyl-d-alanine * smiles:...")
 
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[[Category:gene]]
+
[[Category:metabolite]]
== Gene SJ06735 ==
+
== Metabolite C1 ==
* transcription-direction:
+
* common-name:
** positive
+
** udp-n-acetyl-α-d-muramoyl-l-alanyl-γ-d-glutamyl-meso-2,6-diaminopimeloyl-d-alanyl-d-alanine
* right-end-position:
+
* smiles:
** 71918
+
** cc(c(=o)nc(c)c([o-])=o)nc(=o)c(cccc([n+])c(=o)[o-])nc(=o)ccc(c(=o)[o-])nc(=o)c(c)nc(=o)c(c)oc1(c(o)c(co)oc(c(nc(=o)c)1)op([o-])(op([o-])(occ2(c(o)c(o)c(o2)n3(c=cc(=o)nc(=o)3)))=o)=o)
* left-end-position:
+
* inchi-key:
** 39016
+
** imwoxezvyqdrdf-mczxnmlpsa-j
* centisome-position:
+
* molecular-weight:
** 51.415997   
+
** 1189.924
== Organism(s) associated with this gene  ==
+
== Reaction(s) known to consume the compound ==
* [[S.japonica_carotenoid_curated]]
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* [[PHOSNACMURPENTATRANS-RXN]]
== Reaction(s) associated ==
+
== Reaction(s) known to produce the compound ==
* [[DNA-DIRECTED-RNA-POLYMERASE-RXN]]
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== Reaction(s) of unknown directionality ==
** Category: [[annotation]]
+
{{#set: common-name=udp-n-acetyl-α-d-muramoyl-l-alanyl-γ-d-glutamyl-meso-2,6-diaminopimeloyl-d-alanyl-d-alanine}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: inchi-key=inchikey=imwoxezvyqdrdf-mczxnmlpsa-j}}
** Category: [[orthology]]
+
{{#set: molecular-weight=1189.924}}
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=71918}}
 
{{#set: left-end-position=39016}}
 
{{#set: centisome-position=51.415997    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=1}}
 

Latest revision as of 11:12, 18 March 2021

Metabolite C1

  • common-name:
    • udp-n-acetyl-α-d-muramoyl-l-alanyl-γ-d-glutamyl-meso-2,6-diaminopimeloyl-d-alanyl-d-alanine
  • smiles:
    • cc(c(=o)nc(c)c([o-])=o)nc(=o)c(cccc([n+])c(=o)[o-])nc(=o)ccc(c(=o)[o-])nc(=o)c(c)nc(=o)c(c)oc1(c(o)c(co)oc(c(nc(=o)c)1)op([o-])(op([o-])(occ2(c(o)c(o)c(o2)n3(c=cc(=o)nc(=o)3)))=o)=o)
  • inchi-key:
    • imwoxezvyqdrdf-mczxnmlpsa-j
  • molecular-weight:
    • 1189.924

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality