Difference between revisions of "C5"

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(Created page with "Category:gene == Gene SJ00484 == * transcription-direction: ** positive * right-end-position: ** 97905 * left-end-position: ** 80034 * centisome-position: ** 48.075397...")
(Created page with "Category:gene == Gene SJ02796 == * transcription-direction: ** negative * right-end-position: ** 62410 * left-end-position: ** 21420 * centisome-position: ** 1.974643...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ00484 ==
+
== Gene SJ02796 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 97905
+
** 62410
 
* left-end-position:
 
* left-end-position:
−
** 80034
+
** 21420
 
* centisome-position:
 
* centisome-position:
−
** 48.075397    
+
** 1.974643    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[5.99.1.2-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[5.99.1.3-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* [[ATPASE-RXN]]
−
* [[RXN0-5055]]
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7388]]
+
* [[PWY-7210]]
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-6679]]
+
* [[PWY-7198]]
−
** '''1''' reactions found over '''9''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-5744]]
+
* [[PWY-7184]]
−
** '''4''' reactions found over '''13''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-5743]]
+
* [[PWY-6545]]
−
** '''5''' reactions found over '''13''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-5789]]
+
{{#set: transcription-direction=negative}}
−
** '''8''' reactions found over '''18''' reactions in the full pathway
+
{{#set: right-end-position=62410}}
−
* [[PWY0-1264]]
+
{{#set: left-end-position=21420}}
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
{{#set: centisome-position=1.974643   }}
−
* [[PWY-6722]]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-4381]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=97905}}
 
−
{{#set: left-end-position=80034}}
 
−
{{#set: centisome-position=48.075397   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=7}}
−
{{#set: nb pathway associated=8}}
+
{{#set: nb pathway associated=4}}

Revision as of 09:28, 27 August 2019

Gene SJ02796

  • transcription-direction:
    • negative
  • right-end-position:
    • 62410
  • left-end-position:
    • 21420
  • centisome-position:
    • 1.974643

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway




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