Difference between revisions of "CAAX-proteins"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALPHAGALACTOSID-RXN ALPHAGALACTOSID-RXN] == * direction: ** left-to-right * common-name: ** alpha-g...")
(Created page with "Category:metabolite == Metabolite L-1-phosphatidyl-inositols == * common-name: ** a 1-phosphatidyl-1d-myo-inositol == Reaction(s) known to consume the compound == * 1-PH...")
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[[Category:reaction]]
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[[Category:metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALPHAGALACTOSID-RXN ALPHAGALACTOSID-RXN] ==
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== Metabolite L-1-phosphatidyl-inositols ==
* direction:
 
** left-to-right
 
 
* common-name:
 
* common-name:
** alpha-galactosidase
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** a 1-phosphatidyl-1d-myo-inositol
* ec-number:
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== Reaction(s) known to consume the compound ==
** [http://enzyme.expasy.org/EC/3.2.1.22 ec-3.2.1.22]
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* [[1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN]]
== Reaction formula ==
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* [[1-PHOSPHATIDYLINOSITOL-KINASE-RXN]]
* 1 [[MELIBIOSE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[D-galactopyranose]][c] '''+''' 1 [[Glucopyranose]][c]
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* [[2.4.1.198-RXN]]
== Gene(s) associated with this reaction  ==
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* [[3.1.4.10-RXN]]
* Gene: [[SJ03511]]
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* [[RXN-16261]]
** Category: [[orthology]]
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* [[RXN3O-581]]
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Reaction(s) known to produce the compound ==
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[2.4.1.198-RXN]]
* Gene: [[SJ02145]]
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* [[2.7.8.11-RXN]]
** Category: [[orthology]]
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* [[3.1.4.10-RXN]]
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[PHOSPHATIDYLINOSITOL-3-PHOSPHATASE-RXN]]
* Gene: [[SJ02144]]
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* [[RXN-16261]]
** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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{{#set: common-name=a 1-phosphatidyl-1d-myo-inositol}}
* Gene: [[SJ05258]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s) ==
 
* [[PWY0-1301]], melibiose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1301 PWY0-1301]
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R01101 R01101]
 
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28663 28663]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P16551 P16551]
 
** [http://www.uniprot.org/uniprot/P27756 P27756]
 
** [http://www.uniprot.org/uniprot/P04824 P04824]
 
** [http://www.uniprot.org/uniprot/P06720 P06720]
 
** [http://www.uniprot.org/uniprot/P06280 P06280]
 
** [http://www.uniprot.org/uniprot/P51569 P51569]
 
** [http://www.uniprot.org/uniprot/O93816 O93816]
 
** [http://www.uniprot.org/uniprot/Q03647 Q03647]
 
** [http://www.uniprot.org/uniprot/P14749 P14749]
 
** [http://www.uniprot.org/uniprot/P28351 P28351]
 
** [http://www.uniprot.org/uniprot/P43467 P43467]
 
** [http://www.uniprot.org/uniprot/Q99172 Q99172]
 
** [http://www.uniprot.org/uniprot/P41945 P41945]
 
** [http://www.uniprot.org/uniprot/P41946 P41946]
 
** [http://www.uniprot.org/uniprot/P41947 P41947]
 
** [http://www.uniprot.org/uniprot/Q92457 Q92457]
 
** [http://www.uniprot.org/uniprot/Q92456 Q92456]
 
** [http://www.uniprot.org/uniprot/Q92451 Q92451]
 
** [http://www.uniprot.org/uniprot/O04943 O04943]
 
** [http://www.uniprot.org/uniprot/O04944 O04944]
 
** [http://www.uniprot.org/uniprot/Q39811 Q39811]
 
** [http://www.uniprot.org/uniprot/Q41100 Q41100]
 
** [http://www.uniprot.org/uniprot/Q42656 Q42656]
 
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: common-name=alpha-galactosidase}}
 
{{#set: ec-number=ec-3.2.1.22}}
 
{{#set: nb gene associated=4}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}
 

Revision as of 20:37, 18 December 2020