Difference between revisions of "CARBOXYMETHYLENEBUTENOLIDASE-RXN"
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(Created page with "Category:reaction == Reaction ATDCDm == * direction: ** left-to-right * common-name: ** atp:dcdp phosphotransferase, mitochondria == Reaction formula == * 1.0 ATP[m] '...") |
(Created page with "Category:reaction == Reaction PYRROLINECARBREDUCT-RXN == * direction: ** left-to-right * common-name: ** pyrroline-5-carboxylate reductase * ec-number: ** [http://enzyme.e...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction PYRROLINECARBREDUCT-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** pyrroline-5-carboxylate reductase |
+ | * ec-number: | ||
+ | ** [http://enzyme.expasy.org/EC/1.5.1.2 ec-1.5.1.2] | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 | + | * 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[PRO]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ22264]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ15062]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
− | *** Source: [[ | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
+ | * Gene: [[SJ11815]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY-3341]], L-proline biosynthesis III (from L-ornithine): | ||
+ | ** '''4''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PROSYN-PWY]], L-proline biosynthesis I (from L-glutamate): | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-6344]], L-ornithine degradation II (Stickland reaction): | ||
+ | ** '''2''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-4981]], L-proline biosynthesis II (from arginine): | ||
+ | ** '''3''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway): | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[orthology]]; source: [[ | + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14107 14107] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R01251 R01251] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P32322 P32322] | ||
+ | ** [http://www.uniprot.org/uniprot/P27771 P27771] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CEF7 Q9CEF7] | ||
+ | ** [http://www.uniprot.org/uniprot/P14383 P14383] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PNL8 Q9PNL8] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JWW2 Q9JWW2] | ||
+ | ** [http://www.uniprot.org/uniprot/Q12740 Q12740] | ||
+ | ** [http://www.uniprot.org/uniprot/P22008 P22008] | ||
+ | ** [http://www.uniprot.org/uniprot/P54904 P54904] | ||
+ | ** [http://www.uniprot.org/uniprot/P0A9L8 P0A9L8] | ||
+ | ** [http://www.uniprot.org/uniprot/P17817 P17817] | ||
+ | ** [http://www.uniprot.org/uniprot/P32263 P32263] | ||
+ | ** [http://www.uniprot.org/uniprot/Q12641 Q12641] | ||
+ | ** [http://www.uniprot.org/uniprot/P46725 P46725] | ||
+ | ** [http://www.uniprot.org/uniprot/P74572 P74572] | ||
+ | ** [http://www.uniprot.org/uniprot/Q04708 Q04708] | ||
+ | </div> | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=pyrroline-5-carboxylate reductase}} |
− | {{#set: nb gene associated= | + | {{#set: ec-number=ec-1.5.1.2}} |
− | {{#set: nb pathway associated= | + | {{#set: nb gene associated=3}} |
− | {{#set: reconstruction category=orthology}} | + | {{#set: nb pathway associated=5}} |
− | {{#set: reconstruction tool=pantograph}} | + | {{#set: reconstruction category=annotation|orthology}} |
+ | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 15:02, 5 January 2021
Contents
Reaction PYRROLINECARBREDUCT-RXN
- direction:
- left-to-right
- common-name:
- pyrroline-5-carboxylate reductase
- ec-number:
Reaction formula
- 1 L-DELTA1-PYRROLINE_5-CARBOXYLATE[c] + 1 NADH-P-OR-NOP[c] + 2 PROTON[c] => 1 NAD-P-OR-NOP[c] + 1 PRO[c]
Gene(s) associated with this reaction
- Gene: SJ22264
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ15062
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ11815
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-3341, L-proline biosynthesis III (from L-ornithine):
- 4 reactions found over 3 reactions in the full pathway
- PROSYN-PWY, L-proline biosynthesis I (from L-glutamate):
- 3 reactions found over 4 reactions in the full pathway
- PWY-6344, L-ornithine degradation II (Stickland reaction):
- 2 reactions found over 9 reactions in the full pathway
- PWY-4981, L-proline biosynthesis II (from arginine):
- 3 reactions found over 6 reactions in the full pathway
- ARG-PRO-PWY, L-arginine degradation VI (arginase 2 pathway):
- 3 reactions found over 4 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links