Difference between revisions of "CHALCONE-ISOMERASE-RXN"
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(Created page with "Category:reaction == Reaction RXN-7740 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.14.15.17 ec-1.14.15.17] == Reaction formula == * 1 [...") |
(Created page with "Category:reaction == Reaction ARGSUCCINSYN-RXN == * direction: ** left-to-right * common-name: ** argininosuccinate synthase * ec-number: ** [http://enzyme.expasy.org/EC/6...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction ARGSUCCINSYN-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
+ | * common-name: | ||
+ | ** argininosuccinate synthase | ||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/6.3.4.5 ec-6.3.4.5] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[ATP]][c] '''+''' 1 [[L-ASPARTATE]][c] '''+''' 1 [[L-CITRULLINE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[L-ARGININO-SUCCINATE]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ10377]] |
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** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY-7400]], L-arginine biosynthesis IV (archaebacteria): | ||
+ | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-4984]], urea cycle: | ||
+ | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[ARGSYN-PWY]], L-arginine biosynthesis I (via L-ornithine): | ||
+ | ** '''5''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle): | ||
+ | ** '''9''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-4983]], nitric oxide biosynthesis II (mammals): | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline): | ||
+ | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10932 10932] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01954 R01954] |
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P22768 P22768] | ||
+ | ** [http://www.uniprot.org/uniprot/P0A6E4 P0A6E4] | ||
+ | ** [http://www.uniprot.org/uniprot/P00966 P00966] | ||
+ | ** [http://www.uniprot.org/uniprot/P16460 P16460] | ||
+ | ** [http://www.uniprot.org/uniprot/P13256 P13256] | ||
+ | ** [http://www.uniprot.org/uniprot/P13257 P13257] | ||
+ | ** [http://www.uniprot.org/uniprot/P09034 P09034] | ||
+ | ** [http://www.uniprot.org/uniprot/P24532 P24532] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PHK7 Q9PHK7] | ||
+ | ** [http://www.uniprot.org/uniprot/P57799 P57799] | ||
+ | ** [http://www.uniprot.org/uniprot/Q60174 Q60174] | ||
+ | ** [http://www.uniprot.org/uniprot/P44315 P44315] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JWM1 Q9JWM1] | ||
+ | ** [http://www.uniprot.org/uniprot/P50986 P50986] | ||
+ | ** [http://www.uniprot.org/uniprot/Q06734 Q06734] | ||
+ | ** [http://www.uniprot.org/uniprot/P0C1A1 P0C1A1] | ||
+ | ** [http://www.uniprot.org/uniprot/Q59491 Q59491] | ||
+ | </div> | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: ec-number=ec- | + | {{#set: common-name=argininosuccinate synthase}} |
− | {{#set: nb gene associated= | + | {{#set: ec-number=ec-6.3.4.5}} |
− | {{#set: nb pathway associated= | + | {{#set: nb gene associated=1}} |
− | {{#set: reconstruction category=annotation}} | + | {{#set: nb pathway associated=6}} |
− | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction category=annotation|orthology}} |
+ | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 15:38, 5 January 2021
Contents
Reaction ARGSUCCINSYN-RXN
- direction:
- left-to-right
- common-name:
- argininosuccinate synthase
- ec-number:
Reaction formula
- 1 ATP[c] + 1 L-ASPARTATE[c] + 1 L-CITRULLINE[c] => 1 AMP[c] + 1 L-ARGININO-SUCCINATE[c] + 1 PPI[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: SJ10377
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-7400, L-arginine biosynthesis IV (archaebacteria):
- 7 reactions found over 9 reactions in the full pathway
- PWY-4984, urea cycle:
- 5 reactions found over 5 reactions in the full pathway
- ARGSYN-PWY, L-arginine biosynthesis I (via L-ornithine):
- 5 reactions found over 4 reactions in the full pathway
- ARGSYNBSUB-PWY, L-arginine biosynthesis II (acetyl cycle):
- 9 reactions found over 9 reactions in the full pathway
- PWY-4983, nitric oxide biosynthesis II (mammals):
- 3 reactions found over 3 reactions in the full pathway
- PWY-5154, L-arginine biosynthesis III (via N-acetyl-L-citrulline):
- 8 reactions found over 9 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
External links