Difference between revisions of "CHOLANATE2"

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(Created page with "Category:gene == Gene SJ05933 == * transcription-direction: ** negative * right-end-position: ** 5260 * left-end-position: ** 3581 * centisome-position: ** 4.148325 ==...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MRNA-GUANYLYLTRANSFERASE-RXN MRNA-GUANYLYLTRANSFERASE-RXN] == * direction: ** left-to-right * commo...")
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[[Category:gene]]
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[[Category:reaction]]
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== Gene SJ05933 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MRNA-GUANYLYLTRANSFERASE-RXN MRNA-GUANYLYLTRANSFERASE-RXN] ==
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* transcription-direction:
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* direction:
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** negative
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** left-to-right
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* right-end-position:
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* common-name:
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** 5260
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** mrna guanylyltransferase
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* left-end-position:
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* ec-number:
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** 3581
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** [http://enzyme.expasy.org/EC/2.7.7.50 ec-2.7.7.50]
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* centisome-position:
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== Reaction formula ==
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** 4.148325   
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* 1 [[CPD-8630]][c] '''+''' 1 [[GTP]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[G5-pppR-mRNAs]][c] '''+''' 1 [[PPI]][c]
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== Organism(s) associated with this gene  ==
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== Gene(s) associated with this reaction  ==
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* [[S.japonica_carotenoid_curated]]
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* Gene: [[SJ05217]]
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== Reaction(s) associated ==
 
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* [[2.7.8.23-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[RXN-10827]]
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** Category: [[orthology]]
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** Category: [[annotation]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s)  ==
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* [[RXN-10828]]
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* [[PWY-7375]], mRNA capping I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7375 PWY-7375]
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** Category: [[annotation]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reconstruction information  ==
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== Pathway(s) associated ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[PWY-7769]]
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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** '''2''' reactions found over '''25''' reactions in the full pathway
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== External links  ==
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* [[PWY-6322]]
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* LIGAND-RXN:
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** '''2''' reactions found over '''25''' reactions in the full pathway
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** [http://www.genome.jp/dbget-bin/www_bget?R03828 R03828]
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{{#set: transcription-direction=negative}}
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* UNIPROT:
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{{#set: right-end-position=5260}}
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** [http://www.uniprot.org/uniprot/P32094 P32094]
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{{#set: left-end-position=3581}}
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** [http://www.uniprot.org/uniprot/P33057 P33057]
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{{#set: centisome-position=4.148325    }}
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** [http://www.uniprot.org/uniprot/O60942 O60942]
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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** [http://www.uniprot.org/uniprot/P04298 P04298]
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{{#set: nb reaction associated=3}}
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** [http://www.uniprot.org/uniprot/P04318 P04318]
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{{#set: nb pathway associated=2}}
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** [http://www.uniprot.org/uniprot/P25950 P25950]
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** [http://www.uniprot.org/uniprot/P20979 P20979]
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** [http://www.uniprot.org/uniprot/P11079 P11079]
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** [http://www.uniprot.org/uniprot/Q01159 Q01159]
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** [http://www.uniprot.org/uniprot/Q84424 Q84424]
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** [http://www.uniprot.org/uniprot/Q98257 Q98257]
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** [http://www.uniprot.org/uniprot/Q98268 Q98268]
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** [http://www.uniprot.org/uniprot/P40997 P40997]
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{{#set: direction=left-to-right}}
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{{#set: common-name=mrna guanylyltransferase}}
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{{#set: ec-number=ec-2.7.7.50}}
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{{#set: nb gene associated=1}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 14:24, 26 August 2019

Reaction MRNA-GUANYLYLTRANSFERASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • mrna guanylyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7375, mRNA capping I: PWY-7375
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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