Difference between revisions of "CHONDROITIN-4-SULFOTRANSFERASE-RXN"

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(Created page with "Category:reaction == Reaction RXN-7835 == * direction: ** left-to-right * common-name: ** 2,4-dienoyl-coa reductase * ec-number: ** [http://enzyme.expasy.org/EC/1.3.1.34 e...")
(Created page with "Category:reaction == Reaction CHONDROITIN-4-SULFOTRANSFERASE-RXN == * direction: ** left-to-right * common-name: ** chondroitin 4-sulfotransferase * ec-number: ** [http://...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-7835 ==
+
== Reaction CHONDROITIN-4-SULFOTRANSFERASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 2,4-dienoyl-coa reductase
+
** chondroitin 4-sulfotransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.3.1.34 ec-1.3.1.34]
+
** [http://enzyme.expasy.org/EC/2.8.2.5 ec-2.8.2.5]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-trans-4-cis-dienoyl-CoAs]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Trans-3-enoyl-CoAs]][c]
+
* 1 [[Chondroitin-N-acetyl-galactosamines]][c] '''+''' 1 [[PAPS]][c] '''=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[CHONDROITIN-4-SULFATE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ18892]]
+
* Gene: [[SJ00043]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5138]], fatty acid β-oxidation IV (unsaturated, even number):
+
* [[PWY-6567]], chondroitin sulfate biosynthesis (late stages):
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR115775
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16102 16102]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02180 R02180]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9NPF2 Q9NPF2]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=2,4-dienoyl-coa reductase}}
+
{{#set: common-name=chondroitin 4-sulfotransferase}}
−
{{#set: ec-number=ec-1.3.1.34}}
+
{{#set: ec-number=ec-2.8.2.5}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction CHONDROITIN-4-SULFOTRANSFERASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • chondroitin 4-sulfotransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6567, chondroitin sulfate biosynthesis (late stages):
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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